dnanexus / OpenBioLinks
☆85Updated last year
Alternatives and similar repositories for OpenBio
Users that are interested in OpenBio are comparing it to the libraries listed below
Sorting:
- UKB RAP Notebooks contains a collection of examples of how to use UK Biobank Research Analyses Platform (RAP).☆111Updated last month
- Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DN…☆190Updated last year
- ☆33Updated 7 months ago
- A Python module for loading phenotypic and genetic data from the UK Biobank.☆36Updated 4 years ago
- A curated list for preprocessing, cleaning, mapping and analyzing UK Biobank data.☆53Updated 2 years ago
- Framework for Interpretable Neural Networks☆107Updated 5 months ago
- MetaXcan software and manuscript☆171Updated last month
- Scripts and workflows for use analyzing UK Biobank data from the DNANexus Research Analysis Platform☆68Updated 2 months ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆149Updated 3 weeks ago
- PrediXcan Project☆112Updated 2 years ago
- Polygenic prediction via continuous shrinkage priors☆188Updated 9 months ago
- ☆47Updated 6 months ago
- Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release☆372Updated 2 years ago
- A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.☆70Updated 4 years ago
- Python module for genetic analyses☆15Updated last month
- An R package to manipulate and explore UK Biobank data☆106Updated 2 years ago
- UKB RAP Notebooks Genomics contains a collection of examples of how to use UK Biobank Genomics data on the Research Analysis Platform (RA…☆21Updated 11 months ago
- A toolkit for training deep learning models on genotype, tabular, sequence, image, array and binary data.☆41Updated last month
- Cross-population polygenic prediction☆88Updated 9 months ago
- A demo/example pipeline for analysing wearables data using the RAP.☆18Updated last year
- A software package for calculating, applying, evaluating and plotting the results of polygenic risk scores☆199Updated last year
- Data analysis scripts for "Atlas of plasma NMR biomarkers for health and disease in 118,461 individuals from the UK Biobank".☆14Updated 2 years ago
- ☆43Updated 3 weeks ago
- A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/☆232Updated 3 weeks ago
- Tools for processing Nightingale NMR biomarker data in UK Biobank☆38Updated last week
- A tutorial on how to run basic polygenic risk score analysis☆80Updated 2 years ago
- Neural Network for Polygenic score analysis☆16Updated 2 years ago
- GWAS Summary Statistics for Brain Imaging Phenotypes☆20Updated 3 years ago
- Converting UK Biobank genome-wide genotyping data from one reference build to another☆19Updated last year
- Scripts to analyze TCGA data☆121Updated last year