Python module for genetic analyses
☆19Mar 14, 2026Updated 5 months ago
Alternatives and similar repositories for genal
Users that are interested in genal are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A collection of commonly used formats for quick lookup.☆14Aug 3, 2026Updated last week
- Calling disease-related genes☆17Apr 1, 2026Updated 4 months ago
- GWAS genetics Fine-mapping method☆27Jun 11, 2026Updated 2 months ago
- ☆22Jan 28, 2021Updated 5 years ago
- Open Targets python framework for post-GWAS analysis☆58Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Custom python functions to help you further analyse machine learning models and diagnostic test☆18Jul 10, 2026Updated last month
- ☆23Jun 5, 2021Updated 5 years ago
- Materials accompanying the upstrap paper☆12Oct 19, 2020Updated 5 years ago
- Python interface to the MRC IEU OpenGWAS API☆16Mar 6, 2026Updated 5 months ago
- Two or three subtypes of high grade serous ovarian cancer subtypes fit data from different populations better than four☆12Oct 10, 2018Updated 7 years ago
- A simple python library to identify the most likely strain from the population☆10Jan 11, 2024Updated 2 years ago
- ☆11Dec 17, 2025Updated 7 months ago
- methylR: a single shiny solution from sequencer data to pathway analysis☆12Oct 30, 2024Updated last year
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆12May 31, 2024Updated 2 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Scripts and Data associated with our publication on genomic signatures to discriminate LUAD and LUSC lung cancer types using TCGA data☆11Mar 2, 2022Updated 4 years ago
- ☆15Dec 8, 2023Updated 2 years ago
- ☆11Mar 16, 2022Updated 4 years ago
- Genotyping Immunoglobulin Heavy Chain Variable Genes using Short Read Data☆12May 9, 2025Updated last year
- A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/☆306Aug 3, 2026Updated last week
- An efficient tool for large-scale correlation network analysis☆15Dec 27, 2024Updated last year
- ☆38Jun 8, 2026Updated 2 months ago
- ☆14Feb 17, 2022Updated 4 years ago
- A repository for reproducing experiments from the TxPert paper☆44Mar 25, 2026Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- a dataloader to work with large single cell datasets from lamindb☆41May 20, 2026Updated 2 months ago
- Haplotype-aware Hidden Markov Models for detecting CNVs from bulk RNA-seq☆13Apr 2, 2024Updated 2 years ago
- Code for pre-processing data for the paper: Rest-activity rhythms across the lifespan: cross-sectional findings from the U.S.-representat…☆13Aug 21, 2023Updated 2 years ago
- Public Codebase supporting the paper "Modeling Cellular Perturbations with The Sparse Additive Mechanism Shift Variational Autoencoder" b…☆16Oct 20, 2023Updated 2 years ago
- Pipeline to run scE2G☆56Updated this week
- Network-based module discovery algorithm with high rate of empirically-validated term calls☆14Oct 22, 2023Updated 2 years ago
- GWAS and rare variants tests at high speed using regenie☆16Jul 30, 2026Updated 2 weeks ago
- Integrating long read sequencing enhances short read-based locus-specific transposable element quantification☆12May 12, 2025Updated last year
- Common Workflow Language definition files for workflows introduced in DAT2☆11May 23, 2022Updated 4 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Data Integration tool utilizing network information for predictive analyses☆16May 15, 2025Updated last year
- A positive-unlabeled ensemble learning framework for disease gene prioritization.☆21Nov 10, 2025Updated 9 months ago
- implement gat with batch☆10Nov 28, 2020Updated 5 years ago
- PyPI package to calculate comprehensive confidence intervals for classification positive rate, precision, NPV, and recall using a labeled…☆10Jul 6, 2023Updated 3 years ago
- pyRforest: A comprehensive R package for genomic data analysis featuring scikit-learn Random Forests in R☆13Aug 20, 2024Updated last year
- Code to reproduce analyses in Nasser, Bergman, Fulco, Guckelberger, Doughty et al Nature 2021☆18Apr 8, 2021Updated 5 years ago
- From QC to summary statistics☆17Jun 27, 2020Updated 6 years ago