Alternatives and similar repositories for genal

Users that are interested in genal are comparing it to the libraries listed below

• dvitale199 / GenoTools
  GenoTools: Advanced Genotype Data Analysis A robust suite for processing genotype data, offering genotype calling (.idat to PLINK), comp…
  ☆26Updated last month
• Marijn-Schipper / FLAMES
  FLAMES: Accurate gene prioritization in GWAS loci
  ☆37Updated 3 months ago
• Richard-Packer / DeepPheWAS
  An R package for phenotype generation and association testing for phenome wide associations studies (PheWAS)
  ☆14Updated 11 months ago
• eQTL-Catalogue / eQTL-Catalogue-resources
  ☆48Updated last month
• Kyoko-wtnb / FUMA-circos-plot
  Configs and descriptions of circos plots created on FUMA web application
  ☆15Updated 7 years ago
• Kyoko-wtnb / FUMA-webapp
  Source code of FUMA GWAS web application
  ☆57Updated last year
• wuyangf7 / OPERA
  This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…
  ☆36Updated 9 months ago
• BergmannLab / PascalX
  ☆19Updated 4 months ago
• saorisakaue / GREP
  GREP: Genome for REPositioning drugs
  ☆42Updated 2 years ago
• atgu / ukbb_pan_ancestry
  Analyses conducting GWAS across the UKBB diverse superpopulations
  ☆50Updated last month
• Cloufield / CTGCatalog
  A collection of commonly used resources for complex trait genetics.
  ☆30Updated last month
• shz9 / viprs
  Variational Inference of Polygenic Risk Scores
  ☆28Updated 2 months ago
• xuyu-cam / atlas_genetic_scores_omic_traits
  This repository houses scripts for training genetic scores of omic traits in INTERVAL
  ☆25Updated 2 years ago
• NathanSkene / EWCE
  Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.
  ☆59Updated 4 months ago
• xinhe-lab / ctwas
  causal TWAS (cTWAS)
  ☆43Updated last week
• astrazeneca-cgr-publications / PEACOK
  Phenome Exome Association and Correlation Of Key phenotypes
  ☆27Updated 3 years ago
• FinucaneLab / pops
  ☆79Updated 3 years ago
• totajuliusd / topr
  topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…
  ☆66Updated 8 months ago
• getian107 / PRScsx
  Cross-population polygenic prediction
  ☆85Updated 7 months ago
• immunomethylomics / FlowSorted.BloodExtended.EPIC
  A new extended cell deconvolution for peripheral blood
  ☆18Updated 4 months ago
• StatFunGen / pecotmr
  Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.
  ☆27Updated last week
• qlu-lab / PUMAS
  Fine-tuning polygenic risk score models using GWAS summary statistics
  ☆52Updated 3 months ago
• MalteThodberg / awesome-multitrait-gwas
  List of software packages for multi-trait / multiple-trait / multivariate / high-dimensional GWAS
  ☆31Updated 2 months ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆45Updated last year
• perslab / CELLEX
  CELLEX (CELL-type EXpression-specificity)
  ☆41Updated 2 years ago
• YuanTian1991 / ChAMP
  ☆25Updated 2 years ago
• stormlovetao / eQTLQC
  ☆26Updated 4 years ago
• karthikj89 / scgenetics
  identifying disease critical cell types and programs from single cell RNAseq
  ☆56Updated 3 years ago
• JianYang-Lab / MeDuSA
  MeDuSA is a fine-resolution cellular deconvolution method that leverages scRNA-seq data as a reference to estimate cell-state abundance i…
  ☆43Updated 4 months ago
• Townsend-Lab-Yale / cancereffectsizeR
  cancereffectsizeR: Estimate somatic mutation rates and quantify selection in cancer
  ☆18Updated last month