Converting UK Biobank genome-wide genotyping data from one reference build to another
☆26Jun 20, 2024Updated 2 years ago
Alternatives and similar repositories for liftover_plink_beds
Users that are interested in liftover_plink_beds are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scripts and workflows for use analyzing UK Biobank data from the DNANexus Research Analysis Platform☆78Jan 12, 2026Updated 8 months ago
- A curated list for preprocessing, cleaning, mapping and analyzing UK Biobank data.☆63Mar 31, 2023Updated 3 years ago
- Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DN…☆259Jul 30, 2024Updated 2 years ago
- ☆104Jan 21, 2026Updated 8 months ago
- This repository houses scripts for training genetic scores of omic traits in INTERVAL☆29May 31, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Implementation of LTFH++☆11Nov 17, 2025Updated 10 months ago
- Helper functions for UK Biobank data☆13Dec 6, 2021Updated 4 years ago
- Tools for processing Nightingale NMR biomarker data in UK Biobank☆66Jul 7, 2026Updated 2 months ago
- R package for UK Biobank data wrangling.☆22Apr 26, 2024Updated 2 years ago
- UKB RAP Notebooks contains a collection of examples of how to use UK Biobank Research Analyses Platform (RAP).☆173Feb 19, 2026Updated 7 months ago
- This repo contains a JupyterLab notebook allowing individual SNPs to be filtered from the UKB genotyping data. A few approaches to filter…☆24Jul 18, 2025Updated last year
- Functions to map between ICD-10 terms and PheCodes for UK Biobank hospital electronic health records☆39Dec 27, 2022Updated 3 years ago
- Hypothesis Prioritisation in multi-trait Colocalization☆60Apr 8, 2024Updated 2 years ago
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆36Apr 27, 2026Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Repository for RecallME-v.0.1 a variant calling pipelines benchmarker and optimizer☆13Dec 18, 2023Updated 2 years ago
- A Python module for loading phenotypic and genetic data from the UK Biobank.☆41Nov 3, 2025Updated 10 months ago
- On-instrument and post-acquisition targeted feature extraction☆13Updated this week
- ☆21Aug 20, 2024Updated 2 years ago
- R implementation of Robust Rank Aggregation algortihm☆12Jun 8, 2022Updated 4 years ago
- ASCETIC (Agony-baSed Cancer EvoluTion InferenCe) is a novel framework for the inference of a set of statistically significant temporal pa…☆12Apr 18, 2025Updated last year
- PheTK Official Repository☆38Sep 4, 2026Updated 3 weeks ago
- ☆16Sep 1, 2023Updated 3 years ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆75Apr 26, 2026Updated 5 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆11Jan 20, 2020Updated 6 years ago
- scNOVA : Single-Cell Nucleosome Occupancy and genetic Variation Analysis☆12Jul 29, 2023Updated 3 years ago
- ☆23Jan 4, 2024Updated 2 years ago
- ☆12Dec 4, 2023Updated 2 years ago
- Genetics ToolboX R package☆32Feb 10, 2020Updated 6 years ago
- GREP: Genome for REPositioning drugs☆47Jan 11, 2023Updated 3 years ago
- ☆48Jul 31, 2024Updated 2 years ago
- A powerful TWAS framework leveraging summary-level reference data☆35Apr 1, 2025Updated last year
- single-cell Contamination Detection and Correction☆18Jan 15, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A clustering algorithm that can perform internal validation inspired by forest fire dynamics and self-organized criticality☆18May 18, 2022Updated 4 years ago
- ☆51Feb 2, 2025Updated last year
- ☆14Aug 13, 2026Updated last month
- GWAS and rare variants tests at high speed using regenie☆16Jul 30, 2026Updated last month
- GWAS for survival analysis in large cohorts☆25Jul 24, 2024Updated 2 years ago
- PyIOmica (pyiomica) is a Python package for omics analyses.☆16Oct 6, 2025Updated 11 months ago
- Tofu is a Python tool for generating synthetic UK Biobank data.☆73Jul 25, 2023Updated 3 years ago