dnanexus-rnd / liftover_plink_beds
Converting UK Biobank genome-wide genotyping data from one reference build to another
☆16Updated 8 months ago
Alternatives and similar repositories for liftover_plink_beds:
Users that are interested in liftover_plink_beds are comparing it to the libraries listed below
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆25Updated last year
- Tools for processing Nightingale NMR biomarker data in UK Biobank☆33Updated 2 months ago
- Source code of FUMA GWAS web application☆56Updated last year
- ☆30Updated 4 months ago
- A Python module for loading phenotypic and genetic data from the UK Biobank.☆35Updated 3 years ago
- Data analysis scripts for "Atlas of plasma NMR biomarkers for health and disease in 118,461 individuals from the UK Biobank".☆12Updated 2 years ago
- GWAS for survival analysis in large cohorts☆21Updated 6 months ago
- A GPU version of SAIGE for full GRM GWAS analysis☆16Updated 3 months ago
- ☆11Updated 2 years ago
- This repository contains code associated with the study "Proteomic signatures improve risk predictions for common and rare diseases" (DOI…☆14Updated 7 months ago
- Phenome Exome Association and Correlation Of Key phenotypes☆25Updated 3 years ago
- R package for working in the UK Biobank Research Analysis Platform (RAP)☆48Updated this week
- ukbREST: efficient and streamlined data access for reproducible research of large biobanks☆38Updated 3 years ago
- ☆13Updated 6 years ago
- An R package for phenotype generation and association testing for phenome wide associations studies (PheWAS)☆13Updated 7 months ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆26Updated 9 months ago
- PRS pipeline using PRS_CS☆12Updated last week
- R package for epigraphdb☆27Updated 7 months ago
- Bayesian multi-response Mendelian randomisation☆16Updated 2 years ago
- GENetic Effect-Size distribution Inference from Summary-level data☆14Updated 4 years ago
- ☆23Updated 4 years ago
- Kidney Epigenome and Transcriptome-based multi-stage Prioritization☆16Updated 2 years ago
- Codes for our NPNT paper at Nature Metabolism☆15Updated last year
- A curated list for preprocessing, cleaning, mapping and analyzing UK Biobank data.☆49Updated last year
- GENI plots to visualise results from genome-wide association studies☆27Updated 4 months ago
- R package for UK Biobank data wrangling.☆18Updated 9 months ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆47Updated 2 months ago
- Phenotyping algorithms for common biomarkers in primary care EHR for UK Biobank☆24Updated 4 years ago
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆23Updated 3 years ago
- Python scripts to extract and pre-process UKB data☆30Updated 5 years ago