opentargets / gentropyLinks
Open Targets python framework for post-GWAS analysis
☆41Updated this week
Alternatives and similar repositories for gentropy
Users that are interested in gentropy are comparing it to the libraries listed below
Sorting:
- GWAS gold standards repository☆38Updated last year
- Fine-mapping pipeline for Open Targets Genetics☆26Updated 2 years ago
- Repository for resources we'd like to share with the community.☆24Updated 3 years ago
- Refining the impact of genetic evidence on clinical success☆26Updated last year
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆34Updated 6 months ago
- Phenome Exome Association and Correlation Of Key phenotypes☆27Updated 4 years ago
- Explore and download data from the recount3 project☆36Updated 3 months ago
- Sample code for ldsc analyses in UKBB☆31Updated 2 years ago
- Explore the cancer relevance of your gene list☆51Updated 6 months ago
- causal TWAS (cTWAS)☆45Updated 2 weeks ago
- Every Gene Ever Annotated in published GWAS☆48Updated 2 years ago
- ☆48Updated 3 months ago
- JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes☆23Updated 7 months ago
- Course Materials for Genomics Data Mining☆22Updated this week
- Fine-tuning polygenic risk score models using GWAS summary statistics☆52Updated 5 months ago
- cancereffectsizeR: Estimate somatic mutation rates and quantify selection in cancer☆18Updated last month
- Proteome-Wide Association Study☆47Updated 4 years ago
- Co-expression network management based on WGCNA + k-means☆19Updated 4 years ago
- Documentation on new GWAS Summary Statistics Standard☆23Updated last year
- Code for creating cell-type-specific regulatory element annotation files☆18Updated last year
- Convert GWAS summary statistics to VCF☆48Updated 2 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆13Updated last year
- Statistical power studies for multi-omics experiments.☆32Updated 7 months ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 5 years ago
- Genoppi: an open-source software for robust and standardized integration of proteomic and genetic data☆26Updated last year
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆41Updated 8 months ago
- Linking GWAS studies to genes through cis-regulatory datasets☆39Updated 2 years ago
- Builds a PEP from SRA or GEO accessions☆53Updated last month