hagax8 / ancestry_viz
GTM and t-SNE classification and clustering of 1000 Genomes Project populations
☆11Updated 5 years ago
Related projects ⓘ
Alternatives and complementary repositories for ancestry_viz
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆33Updated 6 years ago
- Main ricopili repo for public releases☆42Updated 5 years ago
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆48Updated 5 years ago
- Code for the in-dev PrediXcan Project☆28Updated 2 years ago
- Source code of FUMA GWAS web application☆53Updated last year
- ☆32Updated last year
- Read PLINK BED/BIM/FAM files into R☆39Updated 3 years ago
- R package for quality control of plink genetic datasets☆55Updated last month
- Convert GWAS summary statistics to VCF☆47Updated last year
- Partners Biobank genomics data QC☆25Updated 4 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆44Updated last year
- Fork of ricopili for development of pipeline for family-based data☆17Updated last year
- Phenome Exome Association and Correlation Of Key phenotypes☆24Updated 3 years ago
- Genetics ToolboX R package☆30Updated 4 years ago
- Statistical fine-mapping pipeline in FinnGen☆26Updated last week
- Get SNP proxies from the 1000 Genomes Project.☆28Updated 6 years ago
- corrplot of LDSC genetic correlation results☆47Updated 2 years ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆36Updated last year
- Extracting disease-specific genomic coordinates from GWAS catalog☆19Updated 4 years ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆30Updated 9 months ago
- ☆14Updated last year
- Generalized linear Mixed Model Association Tests☆36Updated last year
- ☆40Updated 6 years ago
- Harmonise GWAS summary statistics against a reference VCF☆40Updated 3 years ago
- Cross-population polygenic prediction☆69Updated this week
- genetic correlation between phenotypes in the UK biobank☆13Updated 9 months ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆47Updated last month
- PRS-on-SPARK☆18Updated 3 years ago
- Software to help identify overlap between association scan results and GWAS hit catalogs.☆14Updated 2 years ago