GTM and t-SNE classification and clustering of 1000 Genomes Project populations
☆13Feb 18, 2019Updated 7 years ago
Alternatives and similar repositories for ancestry_viz
Users that are interested in ancestry_viz are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 1000 Genomes Project population visualizations using dimensionality reduction☆11Dec 8, 2022Updated 3 years ago
- Bioinformatics workflow that identifies mutational overlaps using data from the 1000 genomes project☆15Jul 30, 2024Updated last year
- Impute to 1000 genomes efficiently by distributing to SGE, including alignment of target to reference, haplotyping, imputing, converting …☆14May 28, 2014Updated 12 years ago
- R package for quality control of plink genetic datasets☆68Mar 27, 2026Updated 2 months ago
- variant integration methods for the 1000 Genomes Project☆21Jan 16, 2018Updated 8 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Using reference-free compressed data structures to analyse thousands of human genomes (1000 Genomes ReadServer)☆14Sep 23, 2017Updated 8 years ago
- A repository that houses example code, applications and teaching material related to QuantEcon☆12Aug 9, 2018Updated 7 years ago
- Easy genetic ancestry predictions in Python☆67May 20, 2026Updated last week
- Löve 2D (lua) Game Development Starter Bundle☆20Jul 24, 2016Updated 9 years ago
- ☆16Mar 24, 2025Updated last year
- Genetic maps interpolated to sites in the 1000 Genomes project☆53Apr 21, 2015Updated 11 years ago
- The index files for sequence and other data created for the 1000 Genomes project and the International Genome Sample Resource☆47Jul 15, 2019Updated 6 years ago
- Software to help identify overlap between association scan results and GWAS hit catalogs.☆15Aug 26, 2022Updated 3 years ago
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1☆18Apr 24, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆17Mar 6, 2024Updated 2 years ago
- Brain Connectivity Analysis on FMRi data in a memory task performed at Baycrest Hospital☆10May 3, 2020Updated 6 years ago
- GeneDMRs is an R package to detect the differentially methylated regions based on genes, gene body, CpG islands and gene body interacted …☆10Nov 18, 2023Updated 2 years ago
- ☆11Apr 25, 2026Updated last month
- A GLM based approach to measure CFC☆16Oct 4, 2019Updated 6 years ago
- ☆28Oct 5, 2018Updated 7 years ago
- Group analysis demo with NeuroPycon☆12Apr 10, 2020Updated 6 years ago
- Simulation of rare and common variants based on 1000 genomes data☆19Sep 24, 2021Updated 4 years ago
- A protocol to estimate global ancestry starting from raw Illumina data☆11Oct 16, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Web application for clinical pharmacogenomic interpretation☆10Mar 3, 2017Updated 9 years ago
- Materials for Module 2 of the SISBID Workshop, Visualization of Biomedical Big Data☆27Jul 17, 2017Updated 8 years ago
- ☆11May 12, 2021Updated 5 years ago
- ☆10Oct 18, 2021Updated 4 years ago
- Simulation toolbox for structural variations.☆10May 30, 2019Updated 6 years ago
- Pipeline to implement a "TAD_Pathways" analysis. Discover candidate genes based on association signals in TADs☆11Dec 21, 2019Updated 6 years ago
- This repository contains projects of Escort and Estag☆26Mar 27, 2025Updated last year
- GenoTools: Advanced Genotype Data Analysis A robust suite for processing genotype data, offering genotype calling (.idat to PLINK), comp…☆36Feb 13, 2026Updated 3 months ago
- Command-line bibliography manager☆15Jun 20, 2025Updated 11 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- code for 'Cell Types of Origin of the Cell Free Transcriptome' by Vorperian et al☆17Feb 22, 2022Updated 4 years ago
- Functions to extract information from Oxford Nanopore sequencing data and alignments☆11Dec 4, 2025Updated 5 months ago
- A labextension to integrate pyflyby with notebooks☆14Dec 15, 2025Updated 5 months ago
- Analysis pipelines for QTL discovery and GWAS signals interpretation☆12Sep 3, 2024Updated last year
- AncestralPaths is a local ancestry painting technique based on genealogies produced by RELATE. The method aims to assign 'path' ancestrie…☆11Jun 29, 2023Updated 2 years ago
- Examples using R and 1000 genomes data☆29May 18, 2021Updated 5 years ago
- Main ricopili repo for public releases☆52Apr 8, 2025Updated last year