hagax8 / ancestry_vizView external linksLinks
GTM and t-SNE classification and clustering of 1000 Genomes Project populations
☆13Feb 18, 2019Updated 6 years ago
Alternatives and similar repositories for ancestry_viz
Users that are interested in ancestry_viz are comparing it to the libraries listed below
Sorting:
- 1000 Genomes Project population visualizations using dimensionality reduction☆11Dec 8, 2022Updated 3 years ago
- Impute to 1000 genomes efficiently by distributing to SGE, including alignment of target to reference, haplotyping, imputing, converting …☆14May 28, 2014Updated 11 years ago
- Bioinformatics workflow that identifies mutational overlaps using data from the 1000 genomes project☆14Jul 30, 2024Updated last year
- R package for quality control of plink genetic datasets☆64Feb 10, 2026Updated last week
- ☆17Mar 6, 2024Updated last year
- Experimental EIGENSOFT performance improvements.☆21Nov 1, 2014Updated 11 years ago
- UMN tracker production software for Mu2e☆11Jan 29, 2025Updated last year
- GenoTools: Advanced Genotype Data Analysis A robust suite for processing genotype data, offering genotype calling (.idat to PLINK), comp…☆31Updated this week
- Materials for Module 2 of the SISBID Workshop, Visualization of Biomedical Big Data☆26Jul 17, 2017Updated 8 years ago
- ☆28Oct 5, 2018Updated 7 years ago
- Easy genetic ancestry predictions in Python☆66Feb 6, 2026Updated last week
- Prioritize structural variants based on CADD scores☆29May 7, 2020Updated 5 years ago
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆35Mar 20, 2018Updated 7 years ago
- This repository contains projects of Escort and Estag☆26Mar 27, 2025Updated 10 months ago
- Brain Connectivity Analysis on FMRi data in a memory task performed at Baycrest Hospital☆10May 3, 2020Updated 5 years ago
- A phase-aware pharmacogenomic diplotyper for PacBio datasets☆20Dec 9, 2025Updated 2 months ago
- A public repo to share methylation risk scores (MRS) derived from UCLA's electronic health records.☆10Aug 25, 2022Updated 3 years ago
- ☆10Oct 18, 2021Updated 4 years ago
- GeneDMRs is an R package to detect the differentially methylated regions based on genes, gene body, CpG islands and gene body interacted …☆10Nov 18, 2023Updated 2 years ago
- A protocol to estimate global ancestry starting from raw Illumina data☆11Oct 16, 2019Updated 6 years ago
- Scalable genomic analysis pipelines, written in WDL☆11Feb 9, 2026Updated last week
- polysat 1.7: tools for polyploid microsatellite analysis☆12Dec 20, 2024Updated last year
- Java implementation of the Louvain method of community detection in graphs☆11Dec 19, 2025Updated last month
- Visualization methods for omics dataset quality control☆10Jul 17, 2025Updated 7 months ago
- Web application for clinical pharmacogenomic interpretation☆10Mar 3, 2017Updated 8 years ago
- A Toolset for Chromosome X-Wide Association Studies☆12May 1, 2018Updated 7 years ago
- implement gat with batch☆10Nov 28, 2020Updated 5 years ago
- A GLM based approach to measure CFC☆16Oct 4, 2019Updated 6 years ago
- PyPI package to calculate comprehensive confidence intervals for classification positive rate, precision, NPV, and recall using a labeled…☆10Jul 6, 2023Updated 2 years ago
- Löve 2D (lua) Game Development Starter Bundle☆20Jul 24, 2016Updated 9 years ago
- Group analysis demo with NeuroPycon☆12Apr 10, 2020Updated 5 years ago
- R package to guess coordinates from a scatter plot (as an image)☆13Nov 27, 2018Updated 7 years ago
- phy-mer☆11Oct 12, 2017Updated 8 years ago
- A web-based version of the codebook, which generates a concise summary of every variable in a dataset.☆14Apr 9, 2022Updated 3 years ago
- Documents that go into methodological detail regarding various statistical procedures.☆11Oct 20, 2018Updated 7 years ago
- Onload handler for GopherJS without the bloat of jQuery☆11Jan 11, 2017Updated 9 years ago
- Control your Sisyphus Kinetic Art Table from Python 3.6 with asyncio☆10Aug 30, 2024Updated last year
- A simple and performant API for working with many genomic file formats in a consistent fashion☆16Mar 23, 2018Updated 7 years ago
- ☆15Mar 24, 2025Updated 10 months ago