GenoML (genoml2) is an open source Python package. It is an automated machine learning (autoML) platform for genomics data
☆33Jun 17, 2025Updated 9 months ago
Alternatives and similar repositories for genoml2
Users that are interested in genoml2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Sep 7, 2022Updated 3 years ago
- GenoTools: Advanced Genotype Data Analysis A robust suite for processing genotype data, offering genotype calling (.idat to PLINK), comp…☆35Feb 13, 2026Updated 2 months ago
- This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3☆13Mar 14, 2019Updated 7 years ago
- Simple scVI implementation☆12Mar 16, 2026Updated 3 weeks ago
- This is a general (somewhat comprehensive) description of the LNG GWAS pipeline which can be used to guide researchers on how-to run a GW…☆43May 18, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Python module to read binary Plink files.☆17Mar 25, 2026Updated 2 weeks ago
- Cython bindings and Python interface to the MEME suite, a collection of tools for the analysis of sequence motifs.☆16Mar 7, 2026Updated last month
- ☆25Mar 27, 2026Updated 2 weeks ago
- ☆18May 30, 2024Updated last year
- Analysis pipelines for QTL discovery and GWAS signals interpretation☆12Sep 3, 2024Updated last year
- Find causal cell-types underlying complex trait genetics☆94Feb 8, 2026Updated 2 months ago
- ☆16Feb 18, 2018Updated 8 years ago
- Python playground for cell-type-specific biology☆12Updated this week
- A signal processing Android application☆11Dec 1, 2020Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Examples on using EpiGraphDB☆29Mar 22, 2021Updated 5 years ago
- ☆20Dec 13, 2023Updated 2 years ago
- The source code and results for different methods on annotating external testing datsets of human and mouse.☆12Apr 21, 2021Updated 4 years ago
- Designer scaffolded DNA DX-based wireframe lattices☆14Jul 28, 2018Updated 7 years ago
- How to calculate raked propensity scores for the ABCD Study cohort☆13Feb 4, 2020Updated 6 years ago
- Code, scripts, some logs and general misc. from to the RNA viruses in MetaTranscriptome discovery project.☆12Jan 5, 2023Updated 3 years ago
- Gene-flank analysis tool☆37Dec 18, 2024Updated last year
- ☆13May 27, 2025Updated 10 months ago
- Contains files created with Design Spark PCB Capture Software☆13Aug 20, 2017Updated 8 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Test version of frechet☆14Mar 30, 2025Updated last year
- Visualise the Results of Inferential Statistics using 'ggplot2'☆13Jun 12, 2023Updated 2 years ago
- Grabbing genome accessions & download info based on taxonomy, using the NCBI REST API, w00t☆12Feb 23, 2025Updated last year
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆59Feb 12, 2021Updated 5 years ago
- Create LocusZoom-style plots in R.☆22Mar 5, 2023Updated 3 years ago
- A GUI tool for easy and smooth visualisation and analysis of Spatial Transcriptomics datasets☆15Apr 13, 2021Updated 5 years ago
- Software for estimating correlation of trait effect sizes across populations☆54May 30, 2025Updated 10 months ago
- LLM-based gene function enrichment tool☆18Feb 19, 2025Updated last year
- ☆20Jan 21, 2026Updated 2 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- brainstorming any ideas with a group of ChatGPT bots with distinct thinking patterns. Group chat with AI.☆22May 15, 2023Updated 2 years ago
- LongcallD: joint calling and phasing of small, structural and mosaic variants from long reads☆103Updated this week
- SUPBUB is a tool that, in linear time, finds out superbubbles(special graph-structures) in a directed graph.☆12Sep 19, 2019Updated 6 years ago
- A motley crew of agents developed by the Monarch Initiative☆24Nov 17, 2025Updated 4 months ago
- Particle dynamics and simulated annealing for chromosome structure calculation☆30Mar 15, 2024Updated 2 years ago
- Scripts, HMMs and search databases for identifying and classifying viral RdRp sequences☆11Jul 4, 2025Updated 9 months ago
- Pangenome Sequence Naming: a backwards-compatible hack to simplify the identification of samples and haplotypes in pangenomes☆45Oct 13, 2024Updated last year