duchene / phylomad
☆19Updated 11 months ago
Alternatives and similar repositories for phylomad
Users that are interested in phylomad are comparing it to the libraries listed below
Sorting:
- Scalable relaxed clock phylogenetic dating☆24Updated last year
- ☆17Updated this week
- Two-dimensional outlier detection algorithm for pinpointing errors in small species-specific stretches of the multiple sequence alignment…☆13Updated 11 months ago
- Bayesian gene tree reconciliation and WGD inference using amalgamated likelihood estimation☆15Updated 2 weeks ago
- ☆9Updated 2 years ago
- ☆12Updated 6 years ago
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆31Updated 2 years ago
- ☆10Updated 3 years ago
- An R-wrapper for lsd2☆9Updated 2 years ago
- ☆13Updated last year
- ☆17Updated 11 months ago
- Bacterial phylogenetics in BEAST 2.☆17Updated 2 years ago
- Python HyPhy: Facilitating HyPhy execution and parsing☆22Updated 3 years ago
- que paquete☆9Updated 9 months ago
- ☆11Updated last year
- PhyloBayes: phylogenetic reconstruction using infinite mixtures (CAT and CAT-GTR) -- serial version (for MPI, see pbmpi.git)☆15Updated 3 years ago
- Fast, scalable, accurate and accessible Bayesian phylogenetics☆37Updated last week
- A tool to root phylogenies☆19Updated 8 months ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆34Updated last year
- Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)☆18Updated 4 years ago
- Main development repository for SpreadGL☆18Updated 7 months ago
- Minimal Assumption Genomic Inference of Coalescence☆14Updated last year
- Quality control for phylogenetic analyses☆13Updated 2 months ago
- Tools to process OrthoFinder output: Calculate the most common gene name of an orthogroup by majority vote and create plots analogous to …☆16Updated 11 months ago
- Inferring global and local strict molecular clocks using root-to-tip regression☆13Updated 9 months ago
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆18Updated 2 years ago
- Horizontal Gene Transfer Detection by Mapping Sequencing Reads☆21Updated 7 years ago
- ☆11Updated 4 years ago
- ☆22Updated 11 years ago
- Simple scripts for concatenate alignments and rename terminals for phylogenetics☆21Updated 2 years ago