duchene / phylomadLinks
☆19Updated last year
Alternatives and similar repositories for phylomad
Users that are interested in phylomad are comparing it to the libraries listed below
Sorting:
- Scalable relaxed clock phylogenetic dating☆27Updated 2 months ago
- ☆11Updated 4 years ago
- ☆18Updated last month
- Quality control for phylogenetic analyses☆13Updated last week
- Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)☆19Updated 5 years ago
- ☆12Updated 6 years ago
- Bacterial phylogenetics in BEAST 2.☆18Updated 2 years ago
- De novo VIral Genome Annotator☆23Updated last year
- Fast, scalable, accurate and accessible Bayesian phylogenetics☆40Updated last week
- Nanopore Real-Time Analysis Tool☆15Updated last year
- easy_sbatch - Batch submitting Slurm jobs with script templates☆16Updated 3 years ago
- ☆11Updated 2 years ago
- a versatile toolkit for processing and analyzing diverse types of sequence data☆21Updated 11 months ago
- Main development repository for SpreadGL☆19Updated last year
- A Nextflow pipeline for running synteny analysis.☆16Updated 5 months ago
- hAMRoaster is an analysis pipeline that can compare the output of tools for detecting AMR genes and provide metrics of their performance☆22Updated last year
- Reference Phylogeny for Bacterial and Archaeal Genomes☆24Updated 3 months ago
- Bayesian gene tree reconciliation and WGD inference using amalgamated likelihood estimation☆16Updated 6 months ago
- An `R` package for various phylogenetic and evolutionary biology data manipulations☆12Updated 7 years ago
- Read contamination removal☆25Updated last year
- Horizontal Gene Transfer Detection by Mapping Sequencing Reads☆21Updated 8 years ago
- Reference genome quality scores☆21Updated 4 years ago
- Protologgger is a tool for the description of novel taxa by providing taxonomic, functional and ecological insights☆14Updated last month
- ☆18Updated last year
- Utility program for extracting sequences from a fasta/fastq file☆35Updated 10 months ago
- PanGenomePipeline☆16Updated last year
- PoSeiDon: positive selection detection and recombination analysis pipeline☆38Updated 2 months ago
- Influenza genome analysis Nextflow workflow☆24Updated 2 months ago
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- Python HyPhy: Facilitating HyPhy execution and parsing☆21Updated 3 years ago