☆20Jun 15, 2024Updated 2 years ago
Alternatives and similar repositories for phylomad
Users that are interested in phylomad are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PhyloBayes: phylogenetic reconstruction using infinite mixtures (CAT and CAT-GTR) -- serial version (for MPI, see pbmpi.git)☆14Oct 21, 2021Updated 5 years ago
- Real time and remote MCMC trace monitoring with BEASTIARY.☆20Oct 13, 2026Updated 2 weeks ago
- Quality control for phylogenetic analyses☆13Oct 19, 2026Updated 2 weeks ago
- SplitsTree4 phylogenetic network tool☆12Sep 21, 2023Updated 3 years ago
- Explore spaces of phylogenetic trees☆30Aug 28, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- RPHAST: Phylogenetic Analysis with Space/Time Models in R☆12Nov 25, 2024Updated last year
- Taxonomy-aware DNA sequence processing toolkit☆34Sep 25, 2026Updated last month
- ☆11Apr 24, 2023Updated 3 years ago
- Java software to analyse phylogeny-trait correlations in discrete traits, accounting for phylogenetic uncertainty via posterior sampling.☆14Sep 26, 2017Updated 9 years ago
- R We There Yet?☆33Mar 27, 2025Updated last year
- ☆11Dec 20, 2022Updated 3 years ago
- Spatial Phylogenetic Reconstruction of Evolutionary Dynamics☆20Jan 13, 2019Updated 7 years ago
- ☆18Jun 11, 2024Updated 2 years ago
- ☆22Mar 25, 2014Updated 12 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- A library to create and handle counts files used with PoMo.☆10Jan 24, 2024Updated 2 years ago
- R package for implementing signal suppression in ggplot2☆30Sep 8, 2026Updated last month
- Main development repository for SpreadGL☆24Jun 18, 2026Updated 4 months ago
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆34Jun 1, 2022Updated 4 years ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆17Feb 19, 2022Updated 4 years ago
- Phylogenetic tree library for JavaScript/Node.js☆39Nov 16, 2022Updated 3 years ago
- ☆12May 12, 2019Updated 7 years ago
- Convergent substitution detection tool based on the PCOC model☆32Dec 2, 2021Updated 4 years ago
- SARS-CoV-2: detecting recombinations in viruses using large data sets with high sequence similarity☆13Aug 14, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Leaping through tree space: continuous phylogenetic inference for rooted and unrooted trees☆12Sep 6, 2023Updated 3 years ago
- Coalescent Odds☆11Mar 1, 2026Updated 8 months ago
- Detecting recombination of viral lineages☆11Dec 23, 2025Updated 10 months ago
- Fast, scalable, accurate and accessible Bayesian phylogenetics☆64Oct 22, 2026Updated last week
- Tasty additions to BEAST 2☆13Aug 10, 2026Updated 2 months ago
- Two-dimensional outlier detection algorithm for pinpointing errors in small species-specific stretches of the multiple sequence alignment…☆18May 27, 2024Updated 2 years ago
- ☆13Aug 4, 2026Updated 2 months ago
- TreeCmp: comparison of trees in polynomial time☆14Aug 25, 2025Updated last year
- Automatically exported from code.google.com/p/densitree☆32Oct 1, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Phylogenetic model exploration with deep learning☆12Jun 15, 2026Updated 4 months ago
- A tool to identify and annotate homoplasies on a phylogeny and sequence alignment☆24Jun 2, 2021Updated 5 years ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Apr 7, 2026Updated 6 months ago
- Python HyPhy: Facilitating HyPhy execution and parsing☆21Dec 7, 2021Updated 4 years ago
- Accurate Species TRee ALgorithm☆282Apr 1, 2024Updated 2 years ago
- Estimating time trees from very large phylogenies☆27Sep 8, 2026Updated last month
- ☆29Jul 18, 2026Updated 3 months ago