Automatically exported from code.google.com/p/prank-msa
☆41Mar 19, 2026Updated 7 months ago
Alternatives and similar repositories for prank-msa
Users that are interested in prank-msa are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PAGAN2 multiple sequence aligner☆12Sep 4, 2026Updated last month
- Fast Tandem Repeat Finder☆20Aug 9, 2026Updated 2 months ago
- A pipeline for homology based annotation utilizing exon structural conservation☆10Mar 13, 2022Updated 4 years ago
- Convergence analysis using relative rate and correcting for phylogenetic relatedness☆12Apr 25, 2025Updated last year
- Multithreaded read analysis☆25May 24, 2026Updated 5 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- VESPA: Very large-scale Evolutionary and Selective Pressure Analyses☆15Mar 18, 2022Updated 4 years ago
- A comprehensive C++ telomere annotation tool for genome assemblies and reads.☆18Oct 2, 2026Updated 3 weeks ago
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆14Apr 28, 2020Updated 6 years ago
- GFF toolkit☆17Oct 20, 2026Updated last week
- repository for materials to do with the VGP phase 1 data freeze, analyses, and publication☆11Dec 23, 2025Updated 10 months ago
- Codon-Aware Multiple Sequence Alignments☆19Oct 17, 2026Updated last week
- ☆10Oct 22, 2018Updated 8 years ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆43Oct 22, 2026Updated last week
- Code, scripts, some logs and general misc. from to the RNA viruses in MetaTranscriptome discovery project.☆12Jan 5, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- This is used to call Codeml to calculate the positive selection of gene in Branch-Sites Model.(Require codon sequence)☆18Nov 18, 2021Updated 4 years ago
- HyPhy 2.5.x (Maintenance Mode — bug fixes only). All active development has moved to HyPhy 3: https://github.com/veg/hyphy-3☆275Oct 13, 2026Updated 2 weeks ago
- Nextflow DSL2 pipeline to generate data for a BlobToolKit analysis. This workflow is part of the Tree of Life production suite.☆18Updated this week
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆67May 17, 2026Updated 5 months ago
- Consensus genome annotation using OMA☆32Jan 14, 2026Updated 9 months ago
- RPHAST: Phylogenetic Analysis with Space/Time Models in R☆12Nov 25, 2024Updated last year
- Analyzing Hi-C data in R with HiCExperiment objects☆16Oct 6, 2026Updated 3 weeks ago
- RNF framework for NGS: simulation of reads, evaluation of mappers, conversion of RNF-compliant data.☆14Nov 10, 2025Updated 11 months ago
- Fast and haplotype-aware assembler☆16Oct 20, 2026Updated last week
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Python HyPhy: Facilitating HyPhy execution and parsing☆21Dec 7, 2021Updated 4 years ago
- Detect key Units in mosaic Tandem Repeats from representative reads from the same locus☆10Aug 2, 2023Updated 3 years ago
- Straightforward & minimalistic removal of poorly aligned regions in sequence alignments.☆17Mar 18, 2019Updated 7 years ago
- ☆16Oct 8, 2026Updated 3 weeks ago
- ☆43Apr 2, 2024Updated 2 years ago
- ☆205Oct 5, 2026Updated 3 weeks ago
- Inference of Ortholog Groups using Hidden Markov Models☆39Oct 22, 2026Updated last week
- ☆28Aug 14, 2026Updated 2 months ago
- Inferring natural selection by comparative population genomic analysis across species☆28Oct 31, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- meta-pipeline for repetitive element de-fragmentation and annotation☆29Oct 1, 2020Updated 6 years ago
- Visualising discordant reads☆16Sep 2, 2015Updated 11 years ago
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.☆110Jun 17, 2022Updated 4 years ago
- ☆20Jun 15, 2024Updated 2 years ago
- A JBrowse 1 plugin to view multiple alignment format (MAF) files☆27Oct 25, 2023Updated 3 years ago
- Detection of outlier genes and species in phylogenomics☆19Oct 8, 2026Updated 3 weeks ago
- ☆10Nov 20, 2025Updated 11 months ago