laduplessis / skylinetools
Utilities and distributions for (birth-death) skyline models.
☆10Updated 5 years ago
Alternatives and similar repositories for skylinetools:
Users that are interested in skylinetools are comparing it to the libraries listed below
- R code for writing Beast2 XML (especially morphology/tip-dating)☆11Updated 8 months ago
- ☆17Updated 3 years ago
- An R-wrapper for lsd2☆9Updated last year
- Analysis of Phylogenetics and Evolution☆64Updated last month
- R package to run BEAST2☆11Updated 2 weeks ago
- R tools for posterior analyses using BEAST☆20Updated 5 years ago
- babette is an R package to work with BEAST2☆45Updated 3 weeks ago
- A textbook for phylogenetic comparative methods.☆43Updated 5 years ago
- R We There Yet?☆30Updated 2 years ago
- R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2☆13Updated last week
- Simplified Tracer in R and Extras☆9Updated 3 months ago
- A course in the theory and practice of phylogenetic inference from DNA sequence data☆28Updated last week
- Phylogenetic ANalyses of DiversificAtion☆24Updated 2 months ago
- A Toolbox for Manipulating Biological Sequences in R☆22Updated 2 years ago
- Source files for online resources of Bioinformatics of Infectious Diseases course☆21Updated 4 years ago
- Scalable relaxed clock phylogenetic dating☆24Updated 11 months ago
- Molecular Epidemiology of Viruses in R☆19Updated 9 years ago
- Exploring the Phylogenetic Signal in Continuous Traits☆16Updated last year
- ☆17Updated 2 weeks ago
- ☆11Updated 2 years ago
- ☆19Updated last year
- This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees☆15Updated 6 years ago
- ☆11Updated last month
- An Amazing Shiny App☆17Updated 3 years ago
- A versatile simulation engine for stochastic population dynamics models.☆22Updated 2 years ago
- STAMPS 2018 course☆16Updated 6 years ago
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆23Updated 7 months ago
- syllabus and lectures for the course☆8Updated 8 years ago
- Calculate distances between phylogenetic trees in R☆32Updated last month
- R Interfaces to Phylogenetic Software☆12Updated 3 weeks ago