collection of bioinformatic scripts
☆32May 3, 2024Updated last year
Alternatives and similar repositories for public_scripts
Users that are interested in public_scripts are comparing it to the libraries listed below
Sorting:
- Bioinformatics scripts☆14Dec 23, 2024Updated last year
- small scripts, functions or bits of code for parsing genomic data☆14Sep 24, 2022Updated 3 years ago
- RNA-seq analysis scripts☆16Jan 8, 2026Updated last month
- Pipelines for NGS, imputation, gwas, ...☆28Dec 18, 2019Updated 6 years ago
- Gene Prediction using MAKER, CEGMA, SNAP, GENEMARK & AUGUSTUS☆10Jul 20, 2017Updated 8 years ago
- tips and tricks in genome-wide association studies - a tutorial☆14Jul 25, 2023Updated 2 years ago
- 生物信息学入门的系列课程,包括Linux, shell, Python 编程,建库测序,基因组学,以及系统进化,常用软件使用等内容。☆22Sep 16, 2021Updated 4 years ago
- Codes for Vmap1.1 and Vmap3☆11Jan 5, 2026Updated last month
- Killifish genomics scripts☆12Feb 19, 2021Updated 5 years ago
- De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk☆10Aug 2, 2023Updated 2 years ago
- ☆10Feb 25, 2024Updated 2 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated last year
- issues for semina "Data Visulization"☆13Dec 23, 2025Updated 2 months ago
- ☆16May 7, 2023Updated 2 years ago
- GCEN: an easy-to-use toolkit for Gene Co-Expression Network analysis and lncRNAs annotation☆22Mar 26, 2022Updated 3 years ago
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 2 years ago
- Calculate circos format data of GC content and GC skew from genome data.☆12Sep 20, 2025Updated 5 months ago
- some useful scripts for working with genomics and sequencing data☆17Oct 31, 2019Updated 6 years ago
- Various scripts that I have created that are useful for genome annotation (repeats & proteins)☆16Feb 21, 2022Updated 4 years ago
- Pipelines for Drosophila genome assembly and analysis☆16May 15, 2022Updated 3 years ago
- scripts for sequence and feature conversion, annotation, analysis ...☆28Mar 17, 2025Updated 11 months ago
- Assemble and following pipeline used in wisent genome paper.☆17Dec 23, 2016Updated 9 years ago
- Main scripts and commands used to analyze goat population genetic and domestication☆19Mar 25, 2019Updated 6 years ago
- Various bioinformatics tools☆20Oct 29, 2024Updated last year
- Custom scripts for monotreme genome project☆19Jan 12, 2021Updated 5 years ago
- easy_sbatch - Batch submitting Slurm jobs with script templates☆16Dec 28, 2021Updated 4 years ago
- ☆24Nov 9, 2017Updated 8 years ago
- Repository☆10Oct 23, 2024Updated last year
- cgat-apps repository☆34Apr 9, 2025Updated 10 months ago
- bioinformatics learning☆13Oct 10, 2023Updated 2 years ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- Here, we de novo assembled 110 representative Setaria accessions from a worldwide collected 1,844 variteies, and performed pan-/graph- ge…☆28Sep 13, 2023Updated 2 years ago
- Utilities written for bioinformatics☆17Sep 27, 2022Updated 3 years ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Feb 22, 2026Updated last week
- ☆10Jan 30, 2020Updated 6 years ago
- A package to create, visualize, and analysis PDB-derived pseudo-ensembles.☆10Jan 7, 2026Updated last month
- A collection of python and bash scripts for various bioinformatics-related tasks☆12Sep 19, 2024Updated last year
- Westlake BioBank for Chinese pilot project☆10May 17, 2023Updated 2 years ago