guokai8 / richRLinks
Function Enrichment analysis and Network construction
☆12Updated 3 months ago
Alternatives and similar repositories for richR
Users that are interested in richR are comparing it to the libraries listed below
Sorting:
- ☆11Updated 5 years ago
- ReMapEnrich is a R-software package to identify significantly enriched regions from ReMap catalogues or user defined catalogues. ReMapEnr…☆15Updated 3 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Updated 6 months ago
- Single-cell RNA Processing Software☆11Updated 3 months ago
- ☆28Updated last year
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 4 years ago
- VennDetail: a bioconductor package for VennDiagram visualization and details extraction☆29Updated 5 months ago
- R package for Flexible dot plots☆29Updated 3 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆32Updated 4 years ago
- ☆14Updated last year
- ☆13Updated 7 years ago
- Analysis and visualization of RNA-Seq results☆30Updated last month
- ☆18Updated last year
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Updated 3 years ago
- Bead-based single-cell atac processing☆33Updated 3 years ago
- An R package to analyze single-cell V(D)J data☆28Updated last year
- ☆20Updated 2 months ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- ☆11Updated 5 months ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆22Updated 6 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- An R package for visualising cell-cell interactions☆43Updated last year
- An R package to visualize bigwigs.☆31Updated 3 years ago
- ☆16Updated 3 years ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆22Updated 2 years ago
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆15Updated 2 years ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆26Updated 3 years ago
- Extract Sequence from Genome According to Annotation File☆38Updated 5 months ago
- Single-cell analysis with non-negative matrix factorization☆45Updated 2 months ago
- Network construction Algorithm☆22Updated last year