waldronlab / GSEABenchmarkeRLinks
Reproducible GSEA Benchmarking
☆13Updated 4 months ago
Alternatives and similar repositories for GSEABenchmarkeR
Users that are interested in GSEABenchmarkeR are comparing it to the libraries listed below
Sorting:
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆21Updated 2 weeks ago
- Helper script for bioconductor/bioconductor_docker☆13Updated 5 months ago
- iDEP: integrated Differential Expression & Pathway analysis☆14Updated 6 years ago
- Template for building a bioconductor workshop package using github actions☆21Updated 2 months ago
- A Grammar of Data Manipulation for Omics Data☆21Updated 5 years ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆10Updated last year
- Read RDS files, in Python☆26Updated this week
- integrative pathway analysis with modern PCA methodology and gene selection☆11Updated 2 years ago
- ☆11Updated 7 years ago
- Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varyi…☆11Updated 5 years ago
- Modular & interactive analysis components for bioinformatics☆18Updated 2 weeks ago
- The blog of tidyomics☆14Updated 2 months ago
- home of the bear's lair☆10Updated 8 years ago
- Computable build reports, package metadata, and download stats from the Bioconductor project☆21Updated last week
- Semantic Similarity in Bio-Ontologies☆17Updated 2 weeks ago
- Foundation of vector-like and list-like containers in Bioconductor☆18Updated last month
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Updated 3 years ago
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Updated 5 years ago
- Gene network analysis☆19Updated 2 years ago
- Source code of the R packge BgeeDB to use data from the Bgee database☆16Updated 7 months ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated last month
- Gene orthologs for model organisms in a tidy data format☆14Updated 2 years ago
- R scripts for analyzing the 1.3 million brain cell data set from 10X Genomics☆12Updated 2 years ago
- The KEGGgraph package to parse KEGG pathways in R into graph objects☆14Updated 5 months ago
- Workshop materials for cBioPortal Webinar 5: API & R Client☆19Updated 5 years ago
- Introduction to the Bioconductor project☆18Updated last week
- This is the ensembldb development repository.☆35Updated 3 weeks ago
- SummarizedBenchmark defines a flexible framework for benchmarking computational methods in R.☆15Updated 4 years ago
- Interactive benchmarking of ranking and assignment methods☆16Updated last month
- R interface to 'Gos'☆39Updated 2 years ago