broadinstitute / Dino4Cells_analysisLinks
☆14Updated last year
Alternatives and similar repositories for Dino4Cells_analysis
Users that are interested in Dino4Cells_analysis are comparing it to the libraries listed below
Sorting:
- Interactive visualization of spatial omics data☆73Updated this week
- Self-Supervised Vision Transformers for multiplexed imaging datasets☆60Updated last year
- SplineDist: Automated Cell Segmentation with Spline Curves☆70Updated last year
- ☆36Updated 2 years ago
- A template repo used to make new napari plugins☆30Updated last week
- TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUma…☆66Updated last month
- Image registration (alignment) software for large microscopy images☆27Updated 2 years ago
- ☆91Updated 2 months ago
- An Interactive Image Segmentation Filter for Multiplex Microscopy☆31Updated 2 months ago
- scPortrait is a scalable toolkit to generate single-cell representations from raw microscopy images☆104Updated last week
- Bio-Formats image file format to raw format converter☆102Updated 3 weeks ago
- Learn morphological states of dynamic cells☆12Updated 2 years ago
- Self-supervised models for encoding protein localization patterns from microscopy images☆79Updated 5 months ago
- ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration☆160Updated 5 months ago
- Command-line client for Fractal☆47Updated 2 weeks ago
- Accurate and efficient spot detection for microscopy data☆113Updated this week
- Piecewise alignment for layers of mosaics☆31Updated 4 months ago
- multimodal whole slide image registration in a graph structure☆97Updated last year
- A plugin to visualise 3D spatial single cell omics☆20Updated 2 months ago
- ☆21Updated last year
- Raw format to OME-TIFF converter☆56Updated last month
- ☆32Updated 5 months ago
- StarDist plugin for napari☆38Updated last year
- Jupyter notebooks for deep lineage analysis of single-cell heterogeneity and cell cycling duration heritability.☆30Updated 5 years ago
- Multiple file format reading directly into napari using pure Python☆39Updated 2 months ago
- ☆33Updated 3 months ago
- ☆69Updated 10 months ago
- Python libraries for loading, running and packaging bioimage.io models☆34Updated 3 weeks ago
- Python package for processing image-based profiling data☆130Updated this week
- A napari plugin for clustering objects according to their properties.☆88Updated 3 weeks ago