Cell Painting Gallery
☆123Mar 16, 2026Updated this week
Alternatives and similar repositories for cellpainting-gallery
Users that are interested in cellpainting-gallery are comparing it to the libraries listed below
Sorting:
- Images and other data from the JUMP Cell Painting Consortium☆182Mar 9, 2026Updated last week
- ☆72Feb 14, 2025Updated last year
- Morphological profiling using deep learning☆124Oct 19, 2024Updated last year
- Optimizing the Cell Painting assay for image-based profiling☆21Aug 11, 2025Updated 7 months ago
- Lists and 384-well plate maps of compounds and genetic perturbations designed to assess connectivity in profiling assays☆25Jan 3, 2025Updated last year
- Python package for processing image-based profiling data☆135Updated this week
- ☆23Jan 10, 2025Updated last year
- Predicting assays Using Morphological Analysis☆14May 24, 2024Updated last year
- Official repo for Recursion's accepted spotlight paper at NeurIPS 2023 Generative AI & Biology workshop.☆73Jun 6, 2025Updated 9 months ago
- Swift Phenotypic Analysis of Cells☆10Jun 8, 2025Updated 9 months ago
- MorphoDiff is a diffusion based generative pipeline to predict high-resolution cell morphological responses under different conditions ba…☆33Aug 13, 2025Updated 7 months ago
- ☆36Oct 21, 2024Updated last year
- Source code from Bray et al., (2017) A dataset of images and morphological profiles of 30,000 small-molecule treatments using the Cell Pa…☆45Dec 20, 2023Updated 2 years ago
- Label Free Prediction of Cell Painting from Brightfield Images☆34Jul 7, 2022Updated 3 years ago
- WS-DINO: a novel framework to use weak label information in a self-supervised setting to learn phenotypic representations from high-conte…☆23Mar 28, 2023Updated 2 years ago
- ShapeEmbedLite: a lightweight self-supervised representation learning model for 2D shape analysis☆21Oct 13, 2025Updated 5 months ago
- Integrating Deep Neural Networks and Symbolic Inference for Organic Reactivity Prediction☆13Jan 8, 2022Updated 4 years ago
- Transform CellProfiler and DeepProfiler data for processing image-based profiling readouts with Pycytominer and other Cytomining tools.☆17Updated this week
- Bencharking pipeline for evaluating Transcriptomic representations for perturbation tasks☆12Nov 5, 2024Updated last year
- Supporting data files, documentation, and updated tips for the Cell Painting protocol☆22Dec 3, 2021Updated 4 years ago
- Deployment infrastructure for the Image Data Resource☆14Feb 21, 2026Updated 3 weeks ago
- Fragment Graphical Variational AutoEncoding for Screening and Generating Molecules☆14Nov 21, 2022Updated 3 years ago
- Evaluating batch correction methods for image-based cell profiling☆15Aug 11, 2025Updated 7 months ago
- Processed Cell Painting Data for the LINCS Drug Repurposing Project☆32Aug 4, 2022Updated 3 years ago
- Image-based Profiling Handbook☆11Apr 15, 2025Updated 11 months ago
- Biologically RElevant VIrtual Staining☆12Dec 10, 2021Updated 4 years ago
- Set of Dockerfile to build a ready-to-use OMERO server☆15Oct 5, 2017Updated 8 years ago
- ☆18Jun 14, 2023Updated 2 years ago
- First place algorithm in ISBI 2024 Light My Cell competition, label-free cell painting☆12Jun 3, 2024Updated last year
- ☆31Feb 22, 2022Updated 4 years ago
- Tools for working with the S800 corpus☆12Sep 17, 2020Updated 5 years ago
- a generalist algorithm for cellular segmentation with human-in-the-loop capabilities☆2,114Updated this week
- Human Protein Atlas - Single Cell Classification 2nd place solution Dual Head pipeline☆13May 25, 2021Updated 4 years ago
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆52Mar 27, 2021Updated 4 years ago
- The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell leve…☆139Aug 14, 2024Updated last year
- Official implementation of "CellFlux: Simulating Cellular Morphology Changes via Flow Matching" (ICML 2025)☆27Sep 3, 2025Updated 6 months ago
- Modeling complex perturbations with CellFlow☆124Updated this week
- ☆12Jul 11, 2022Updated 3 years ago
- Jupyter notebook based multiplex image processing pipeline.☆10Updated this week