Images and other data from the JUMP Cell Painting Consortium
☆183Mar 23, 2026Updated this week
Alternatives and similar repositories for datasets
Users that are interested in datasets are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Cell Painting Gallery☆123Mar 16, 2026Updated last week
- ☆72Feb 14, 2025Updated last year
- Morphological profiling using deep learning☆124Oct 19, 2024Updated last year
- ☆20Jan 13, 2026Updated 2 months ago
- Compendium of tools for the Imaging Platform☆15Mar 9, 2026Updated 2 weeks ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Python package for processing image-based profiling data☆135Mar 17, 2026Updated last week
- Optimizing the Cell Painting assay for image-based profiling☆21Aug 11, 2025Updated 7 months ago
- Official repo for Recursion's accepted spotlight paper at NeurIPS 2023 Generative AI & Biology workshop.☆73Jun 6, 2025Updated 9 months ago
- Self-supervised models for encoding protein localization patterns from microscopy images☆83Aug 5, 2025Updated 7 months ago
- Code for paper: "Removing Biases from Molecular Representations via Information Maximization"☆20Apr 4, 2024Updated last year
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆55Aug 11, 2025Updated 7 months ago
- Source code from Bray et al., (2017) A dataset of images and morphological profiles of 30,000 small-molecule treatments using the Cell Pa…☆45Dec 20, 2023Updated 2 years ago
- Code and models for Molecule-Morphology Contrastive Pretraining (MoCoP)☆13Apr 12, 2024Updated last year
- Find profile pairs and compute retrieval metrics between them.☆22Mar 1, 2026Updated 3 weeks ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Official implementation of "CellFlux: Simulating Cellular Morphology Changes via Flow Matching" (ICML 2025)☆29Sep 3, 2025Updated 6 months ago
- ☆24Jan 10, 2025Updated last year
- Lists and 384-well plate maps of compounds and genetic perturbations designed to assess connectivity in profiling assays☆25Jan 3, 2025Updated last year
- Learning Single-Cell Perturbation Responses using Neural Optimal Transport☆165Oct 31, 2024Updated last year
- Cell Painting and other pipelines from the Imaging Platform☆23Jan 28, 2025Updated last year
- Methods for Image-Based Cell Profiling☆51May 8, 2024Updated last year
- Processed Cell Painting Data for the LINCS Drug Repurposing Project☆32Aug 4, 2022Updated 3 years ago
- Run encapsulated docker containers with CellProfiler in the Amazon Web Services infrastructure.☆45Feb 2, 2026Updated last month
- WS-DINO: a novel framework to use weak label information in a self-supervised setting to learn phenotypic representations from high-conte…☆23Mar 28, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Predicting Cell Health with Morphological Profiles☆40Jan 26, 2022Updated 4 years ago
- ☆14Aug 14, 2023Updated 2 years ago
- The code for "Learning Molecular Representation in a Cell"☆40Mar 6, 2025Updated last year
- Materials from the 2022 UGM☆46Oct 31, 2022Updated 3 years ago
- ☆56Oct 29, 2022Updated 3 years ago
- ☆31Feb 22, 2022Updated 4 years ago
- This repo will contain the code for training DINO models and extracting features☆16Aug 4, 2023Updated 2 years ago
- Predicting assays Using Morphological Analysis☆14May 24, 2024Updated last year
- Supporting data files, documentation, and updated tips for the Cell Painting protocol☆22Dec 3, 2021Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- CUDA-accelerated 3D BioImage Computing (ICCV BIC 2025)☆27Mar 21, 2026Updated last week
- Inference of switch-like differential expression along single-cell trajectories☆22Oct 24, 2017Updated 8 years ago
- The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell leve…☆140Aug 14, 2024Updated last year
- Swift Phenotypic Analysis of Cells☆10Jun 8, 2025Updated 9 months ago
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆52Mar 27, 2021Updated 5 years ago
- Fragment Graphical Variational AutoEncoding for Screening and Generating Molecules☆14Nov 21, 2022Updated 3 years ago
- ☆1,514Nov 12, 2025Updated 4 months ago