Official repo for Recursion's accepted spotlight paper at NeurIPS 2023 Generative AI & Biology workshop.
☆71Jun 6, 2025Updated 8 months ago
Alternatives and similar repositories for maes_microscopy
Users that are interested in maes_microscopy are comparing it to the libraries listed below
Sorting:
- External repo for the EFAAR benchmarking paper☆25Feb 11, 2026Updated 2 weeks ago
- Evaluating batch correction methods for image-based cell profiling☆15Aug 11, 2025Updated 6 months ago
- Self-Supervised Vision Transformers for multiplexed imaging datasets☆60Jul 1, 2024Updated last year
- Cell Painting Gallery☆122Updated this week
- WS-DINO: a novel framework to use weak label information in a self-supervised setting to learn phenotypic representations from high-conte…☆23Mar 28, 2023Updated 2 years ago
- Phenexplain source code☆14Oct 15, 2025Updated 4 months ago
- Images and other data from the JUMP Cell Painting Consortium☆182Feb 16, 2026Updated last week
- Morphological profiling using deep learning☆124Oct 19, 2024Updated last year
- MultiModal Big Image Data Sharing and Exploration☆18Jan 13, 2023Updated 3 years ago
- An Interactive Image Segmentation Filter for Multiplex Microscopy☆31Feb 12, 2026Updated 2 weeks ago
- ☆11Oct 10, 2024Updated last year
- Pytorch implementation of BiomedCLIP vision model with LoRA tuning☆43May 18, 2023Updated 2 years ago
- ☆22May 1, 2025Updated 9 months ago
- Python interface and preprocessing pipeline for the BBBC021 dataset of cellular images☆13Sep 19, 2021Updated 4 years ago
- Official PyTorch implementation of ChAda-ViT [CVPR 2024]☆41Apr 11, 2025Updated 10 months ago
- Time arrow prediction for live-cell microscopy☆21Jun 17, 2024Updated last year
- UMM-Discovery is a fully unsupervised deep learning method to cluster cellular images with similar phenotypes together, solely based on t…☆11Nov 4, 2020Updated 5 years ago
- ☆12Jul 11, 2022Updated 3 years ago
- ShapeEmbedLite: a lightweight self-supervised representation learning model for 2D shape analysis☆20Oct 13, 2025Updated 4 months ago
- [MICCAI 2024] RadiomicsFill-Mammo: Synthetic Mammogram Mass Manipulation with Radiomics Features☆10Aug 22, 2025Updated 6 months ago
- Implementation of the Pairformer model used in AlphaFold 3☆14Updated this week
- READMEs for RxRx.ai datasets☆27Jun 6, 2025Updated 8 months ago
- C++ whole slide image reader with native python bindings☆32Jan 31, 2026Updated last month
- A flexible Julia toolkit for high-dimensional cellular profiles☆13Jul 14, 2023Updated 2 years ago
- ☆12Jun 4, 2025Updated 8 months ago
- Contextual Vision Transformers for Robust Representation Learning☆15Oct 19, 2023Updated 2 years ago
- Code and models for Molecule-Morphology Contrastive Pretraining (MoCoP)☆13Apr 12, 2024Updated last year
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆12Feb 18, 2026Updated last week
- Simple scVI implementation☆12Jan 19, 2026Updated last month
- Label Free Prediction of Cell Painting from Brightfield Images☆34Jul 7, 2022Updated 3 years ago
- The SAIL blog☆13Updated this week
- Learn morphological states of dynamic cells☆12Apr 16, 2023Updated 2 years ago
- Quantitative analysis of cell motility behaviors☆13Feb 21, 2025Updated last year
- URL router for ReactPy☆15Feb 14, 2026Updated 2 weeks ago
- Code and models for MICCAI23 paper: "Self-Supervised Learning for Endoscopy Video Analysis".☆21Oct 2, 2023Updated 2 years ago
- ☆72Feb 14, 2025Updated last year
- ☆15Jun 2, 2022Updated 3 years ago
- 3D segmentation for cells and organoids of 3D multichannel images☆27Jun 24, 2025Updated 8 months ago
- single-cell latent diffusion model☆40Feb 16, 2026Updated last week