A simple gene co-expression analyses workflow powered by tidyverse and graph analyses
☆217Sep 3, 2025Updated last year
Alternatives and similar repositories for SimpleTidy_GeneCoEx
Users that are interested in SimpleTidy_GeneCoEx are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A tidyverse and grammar of graphics powered line traces visualizer☆31Sep 3, 2025Updated last year
- Make customized upset plots: from raw data to plots☆62Sep 3, 2025Updated last year
- A tutorial for pathway visualization using tidyverse, igraph, and ggraph☆61Oct 26, 2024Updated last year
- Online R learning for applied statistics☆553Sep 3, 2025Updated last year
- Download FASTQ files from SRA or ENA repositories.☆404May 16, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆32Jul 13, 2026Updated last month
- Predict genic elements as splice sites, exons or genes, along eukaryotic DNA sequences☆18Jul 18, 2026Updated last month
- ☆261Jan 24, 2025Updated last year
- ☆14Aug 3, 2022Updated 4 years ago
- 16S pipeline using qiime2 created with snakemake☆12Aug 21, 2026Updated 2 weeks ago
- DNAscan2 is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring v…☆14May 7, 2024Updated 2 years ago
- ☆89Mar 23, 2026Updated 5 months ago
- ☆15Jun 6, 2023Updated 3 years ago
- Draw heatmap simply using a tidy data frame☆364Feb 7, 2026Updated 6 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆17Sep 28, 2022Updated 3 years ago
- A tool for visualization of pairwise alignments of multiple sequences☆19Aug 12, 2025Updated last year
- tool for dating gene age by micro- and macro-synteny with high speed and accuracy☆18Jan 3, 2026Updated 8 months ago
- Website for BIS 015L, Data Science for Biologists, UC Davis.☆187Mar 12, 2026Updated 5 months ago
- Tool for plotting sequencing data along genomic coordinates.☆351Dec 12, 2025Updated 8 months ago
- Analyzing and visualizing KEGG information using the grammar of graphics☆247Oct 14, 2025Updated 10 months ago
- A Tidyverse-based workflow for local synteny visualization☆19Sep 3, 2025Updated last year
- A genome completeness evaluation tool based on miniprot☆262Aug 17, 2026Updated 2 weeks ago
- Align proteins to genomes with splicing and frameshift☆417Jan 5, 2026Updated 7 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- PCAtools: everything Principal Components Analysis☆381Updated this week
- tools in python and R for analyzing biological count data, especially from single cell RNAseq☆23Feb 1, 2024Updated 2 years ago
- single cell Gene co-Expression Network Analysis☆10Sep 6, 2022Updated 3 years ago
- Tool to plot synteny and structural rearrangements between genomes☆354Jul 27, 2026Updated last month
- Genome mapping and spliced alignment of cDNA or amino acid sequences☆114Jul 11, 2026Updated last month
- A pipeline to identify BLAST hits and perform phylogenetic analysis across multiple queries and local genome databases☆27Updated this week
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆26Nov 17, 2022Updated 3 years ago
- Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023☆547Jan 14, 2026Updated 7 months ago
- ☆27Jul 26, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Just Annotate My Genome☆19May 21, 2026Updated 3 months ago
- ☆15Apr 16, 2026Updated 4 months ago
- Gene-based test of allele-specific expression without requiring haplotype information☆16Mar 20, 2018Updated 8 years ago
- Infering ancestral synteny with hierarchical orthologous groups☆38Jun 26, 2026Updated 2 months ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Nov 18, 2025Updated 9 months ago
- Reference-agnostic Representation and Visualization of Pan-genomes☆19Sep 16, 2021Updated 4 years ago
- Long-reads Gap-free Chromosome-scale Assembler☆79Mar 21, 2023Updated 3 years ago