cxli233 / SimpleTidy_GeneCoExLinks
A simple gene co-expression analyses workflow powered by tidyverse and graph analyses
☆205Updated 11 months ago
Alternatives and similar repositories for SimpleTidy_GeneCoEx
Users that are interested in SimpleTidy_GeneCoEx are comparing it to the libraries listed below
Sorting:
- Visualize and annotate genomic coverage with ggplot2☆260Updated 5 months ago
- ☆199Updated 3 months ago
- Analyzing and visualizing KEGG information using the grammar of graphics☆230Updated 2 months ago
- Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.☆121Updated 5 years ago
- Bioconductor teaching and education committee☆49Updated this week
- website for the rnaseq course☆102Updated last month
- Visualizing transcript structure and annotation using ggplot2☆156Updated 10 months ago
- Download FASTQ files from SRA or ENA repositories.☆336Updated this week
- Visualization of Functional Enrichment Result☆246Updated last month
- ChIP peak Annotation, Comparison and Visualization☆234Updated 2 months ago
- karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome☆317Updated 2 weeks ago
- repository of the 2-day course "First steps with R in Life Sciences" from SIB-training☆47Updated 4 months ago
- A package for including transposable elements in differential enrichment analysis of sequencing datasets.☆252Updated 4 months ago
- Generate IGV style locus tracks from bigWig files in R☆162Updated 7 months ago
- Easily install and load packages from the tidyomcis ecosystem☆67Updated last year
- Introduction to bulk RNA-seq☆108Updated last month
- ☆72Updated 3 years ago
- Tool for plotting sequencing data along genomic coordinates.☆295Updated last month
- Web application to explore the Sequence Read Archive.☆218Updated 2 months ago
- Fast Gene Set Enrichment Analysis☆403Updated last week
- This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster☆170Updated 4 years ago
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆165Updated 6 months ago
- scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing data in an easy…☆163Updated this week
- ☆93Updated last month
- The package wrapping the book, for deployment via the Bioconductor build system.☆86Updated 7 months ago
- RNA-seq workflow using STAR and DESeq2☆341Updated 10 months ago
- ☆175Updated 4 years ago
- Tool for the Quality Control of Long-Read Defined Transcriptomes☆227Updated this week
- Step-by-step analysis pipeline for RNA-seq data☆124Updated last year
- dN/dS methods to quantify selection in cancer and somatic evolution☆222Updated last month