IKIM-Essen / RiboSnakeLinks
16S pipeline using qiime2 created with snakemake
☆12Updated last month
Alternatives and similar repositories for RiboSnake
Users that are interested in RiboSnake are comparing it to the libraries listed below
Sorting:
- ☆10Updated 8 months ago
- Integrative virome pipeline☆13Updated last year
- The Microbial Co-occurrence Network Explorer☆21Updated 2 years ago
- Metagenome analysis using the Kraken software suite☆35Updated 3 years ago
- ☆17Updated last month
- A pipeline for construction and graphical visualization of annotated pangenome networks.☆17Updated 7 years ago
- Pipeline to apply encoded Kmer analysis to protein sequences☆16Updated last week
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆29Updated 8 months ago
- The RepeatScout 1.0.5, written by Pevzner et al., source code for browsing. The official release and more information are available at h…☆16Updated 2 years ago
- Pan-genome Analysis☆12Updated 7 months ago
- A pipeline for whole genome assembly☆16Updated 3 years ago
- ☆24Updated 8 months ago
- ☆10Updated 2 months ago
- A pipeline for comprehensive genomic analyses of Mycobacterium tuberculosis with a focus on clinical decision making as well as research☆19Updated 2 weeks ago
- Improved Inference of Ortholog Groups using Hidden Markov Models☆37Updated 3 months ago
- Reference Phylogeny for Bacterial and Archaeal Genomes☆25Updated 4 months ago
- Pipeline for metagenomic community analysis using DNA isolated from virus-like particles☆13Updated 5 years ago
- Processing support for Greengenes2☆14Updated 2 years ago
- ☆31Updated 4 years ago
- ☆15Updated 2 months ago
- Repository for codes, analyses and visualizations for the CAMI II challenges☆14Updated 2 years ago
- Toolkit for establishing, updating, and validating GTDB species clusters☆20Updated last month
- metabolic heatmap☆22Updated 6 years ago
- ☆11Updated 9 months ago
- ☆13Updated last year
- hAMRoaster is an analysis pipeline that can compare the output of tools for detecting AMR genes and provide metrics of their performance☆22Updated last year
- Metagenomic Intra-Species Diversity Analysis (MIDAS)☆40Updated last year
- ☆17Updated 2 years ago
- Plot microbiome time series in parallel☆27Updated 2 years ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆13Updated 5 months ago