Alternatives and similar repositories for ggPlantmap

Users that are interested in ggPlantmap are comparing it to the libraries listed below

• FrederickHuangLin / ANCOMBC
  Differential abundance (DA) and correlation analyses for microbial absolute abundance data
  ☆126Updated last month
• YuLab-SMU / ggtreeExtra
  Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”
  ☆94Updated last month
• david-barnett / microViz
  R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.
  ☆120Updated 2 months ago
• loukesio / ggvolc
  𝐠𝐠𝐯𝐨𝐥𝐜 effortlessly translates differential expression datasets and RNAseq data into informative volcano plots. Highlight genes of …
  ☆65Updated last month
• XiaoLuo-boy / ggheatmap
  ggplot2 version of heatmap
  ☆90Updated 2 years ago
• yiluheihei / microbiomeMarker
  R package for microbiome biomarker discovery
  ☆190Updated 8 months ago
• grunwaldlab / Population_Genetics_in_R
  A primer for computational tools to analyze genetics of populations in R
  ☆88Updated 4 years ago
• mhahsler / rBLAST
  Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package
  ☆112Updated 3 weeks ago
• waldronlab / lefser
  R implementation of the LEfSe method
  ☆59Updated this week
• thibautjombart / adegenet
  adegenet: a R package for the multivariate analysis of genetic markers
  ☆195Updated 8 months ago
• rcastelo / atena
  Analysis of transposable elements
  ☆13Updated this week
• ChiLiubio / microeco
  An R package for data analysis in microbial community ecology
  ☆252Updated this week
• CerrenRichards / ggplot2-for-publications
  This tutorial runs through the basics of ggplot2 and how to make a figure ready for publication.
  ☆54Updated 5 years ago
• showteeth / ggcoverage
  Visualize and annotate genomic coverage with ggplot2
  ☆264Updated 9 months ago
• emmanuelparadis / ape
  Analysis of Phylogenetics and Evolution
  ☆73Updated 4 months ago
• cxli233 / SimpleTidy_GeneCoEx
  A simple gene co-expression analyses workflow powered by tidyverse and graph analyses
  ☆209Updated last month
• stefpeschel / NetCoMi
  Network construction, analysis, and comparison for microbial compositional data
  ☆171Updated 7 months ago
• TickingClock1992 / RIdeogram
  ☆187Updated 5 years ago
• roblanf / sangeranalyseR
  functions to analyse sanger sequencing reads in R
  ☆103Updated 7 months ago
• jbisanz / qiime2R
  Import qiime2 artifacts to R
  ☆173Updated 10 months ago
• ChiLiubio / file2meco
  Transform files to the microtable object with microeco package
  ☆28Updated 2 months ago
• royfrancis / pophelper
  An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
  ☆149Updated 2 years ago
• shandley / Microbiome-Analysis-Using-R
  Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.
  ☆27Updated 3 years ago
• bulksoil / BioProtocol
  Repo for a Microbiome Protocol
  ☆10Updated 7 years ago
• lch14forever / microbiomeViz
  Visualize microbiome data with black magic ggtree
  ☆68Updated 5 years ago
• microbiome / mia
  Microbiome analysis
  ☆53Updated this week
• Tom-Jenkins / mapmixture
  R package and web app for spatial visualisation of admixture on a projected map
  ☆44Updated 6 months ago
• Github-Yilei / ggcor
  The copyright of ggcor belongs to HouyunHuang who closed the account of github. Refer to the Citation for details
  ☆41Updated 4 years ago
• YuLab-SMU / MicrobiotaProcess
  A comprehensive R package for deep mining microbiome
  ☆190Updated last month
• raynamharris / Shell_Intro_for_Bioinformatics_STG
  Intro to Shell for Bioinformatics - with STG examples
  ☆28Updated 9 years ago