☆22Oct 28, 2022Updated 3 years ago
Alternatives and similar repositories for ATAC_IterativeOverlapPeakMerging
Users that are interested in ATAC_IterativeOverlapPeakMerging are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code for the analysis performed in the paper "Transcription factor stoichiometry, motif affinity and syntax regulate single-cell chromati…☆12Oct 16, 2025Updated 5 months ago
- Decima is a Python library to train sequence models on single-cell RNA-seq data.☆64Mar 20, 2026Updated 2 weeks ago
- Pipeline for demultiplexing and aligning both ATAC and RNA data generated in SHARE-seqV2☆16Apr 21, 2023Updated 2 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆60Mar 26, 2026Updated 2 weeks ago
- Programming for Biology Class @ CSHL 2022☆14Oct 4, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- easy_sbatch - Batch submitting Slurm jobs with script templates☆16Dec 28, 2021Updated 4 years ago
- Jupyter Notebooks and related files for the Center for High Performance Computing's Python lectures☆15Sep 19, 2025Updated 6 months ago
- Joint normalization of multiple Hi-C matrices, visualization and detection of differential chromatin interactions, supporting covariates.☆10Apr 22, 2022Updated 3 years ago
- time course regulatory analysis from paired gene expression and chromatin accessibility time course data☆11Nov 10, 2023Updated 2 years ago
- scRNA seq analysis using Seurat V3☆13Jun 23, 2021Updated 4 years ago
- mouse_fullStack_annotations☆13Jun 29, 2023Updated 2 years ago
- A Package for Ribosome Profiling Data Analysis☆18Jan 17, 2026Updated 2 months ago
- Sparse Lazy Array Format (SLAF) for Single-Cell Genomics☆58Mar 31, 2026Updated last week
- Script to help assessing the evolutionary history of a TE family☆16Sep 5, 2019Updated 6 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆20Jun 23, 2023Updated 2 years ago
- ATAC-seq snakemake pipeline☆90Feb 13, 2020Updated 6 years ago
- ☆18Oct 23, 2025Updated 5 months ago
- Workflow for analysis of healthy human kidney by snRNAseq and snATACseq☆25Mar 13, 2023Updated 3 years ago
- Micro DNA identification☆23Aug 5, 2021Updated 4 years ago
- An information model for representing variant annotations.☆27Mar 12, 2026Updated 3 weeks ago
- R package for CS-CORE, a statistical method for cell-type-specific co-expression inference from single cell RNA-sequencing data☆26Feb 9, 2026Updated 2 months ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Mar 7, 2025Updated last year
- A project to develop the R Shiny applications.☆12May 13, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- The GitHub for CLUES2, a method for inferring and evaluating evidence for selection.☆18Apr 9, 2025Updated last year
- shifts hg19/38 genomic position for feasible input format.☆12Jun 8, 2023Updated 2 years ago
- 一些用于画图的R脚本☆22Jan 8, 2026Updated 3 months ago
- ☆39Jan 19, 2026Updated 2 months ago
- Tutorial for using the perturbseq library to load and manipulate experiments☆24Aug 7, 2019Updated 6 years ago
- A machine learning-based genotyping tool for structural variation in short reads☆26Sep 15, 2025Updated 6 months ago
- My configuration files on macOS☆11Jan 27, 2026Updated 2 months ago
- ☆10Jan 19, 2019Updated 7 years ago
- Fine mapping of genes associated with Parkinson's Disease using a variety of methods☆11Mar 7, 2022Updated 4 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- user-friendly pipeline for GWAS fine-mapping☆14Mar 9, 2025Updated last year
- Fast and Efficient Tool to Simulate Summary Statistics from Genome-Wide Association Studies☆12May 21, 2024Updated last year
- harmonization, liftover, and imputation of summary statistics from GWAS☆36Aug 28, 2020Updated 5 years ago
- ☆12Dec 8, 2022Updated 3 years ago
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Mar 22, 2019Updated 7 years ago
- BrainSeq Phase II project lead by LIBD for the BrainSeq Consortium☆11Jan 7, 2024Updated 2 years ago
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆34Mar 19, 2025Updated last year