hakyimlab / summary-gwas-imputationLinks
harmonization, liftover, and imputation of summary statistics from GWAS
☆33Updated 4 years ago
Alternatives and similar repositories for summary-gwas-imputation
Users that are interested in summary-gwas-imputation are comparing it to the libraries listed below
Sorting:
- Estimate genetic correlation using predicted expression☆22Updated 7 years ago
- GWAS genetics Fine-mapping method☆25Updated 9 months ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆27Updated last week
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆36Updated 10 months ago
- Code supporting analyses in paper on fine-mapping AD loci☆16Updated 4 years ago
- An R package for creating ggplot2 based miami plots.☆17Updated 5 months ago
- ☆23Updated 4 years ago
- Colocalization analysis of genetic association signals☆52Updated last month
- ☆23Updated 2 weeks ago
- GENI plots to visualise results from genome-wide association studies☆29Updated 9 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆41Updated 7 years ago
- A collection of various utilities for GWAS summary statistics☆29Updated last year
- Create Regional Association Plots☆12Updated last year
- Regional association plots☆25Updated last year
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- ☆18Updated this week
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Updated 3 years ago
- Primo☆16Updated 3 years ago
- Mediated Expression Score Regression (MESC)☆26Updated 3 years ago
- ☆19Updated last year
- Manhattan++☆28Updated last year
- 🌓 Allele specific analyses across cell states and conditions☆10Updated 2 years ago
- ☆34Updated 2 years ago
- FLAMES: Accurate gene prioritization in GWAS loci☆41Updated 5 months ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆38Updated 2 years ago
- ☆21Updated 4 months ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated last year
- ☆35Updated 4 years ago
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆13Updated 2 years ago
- This is a pipeline for calculating weights for TWAS☆32Updated 3 years ago