rozemon / portfolioLinks
☆12Updated 3 years ago
Alternatives and similar repositories for portfolio
Users that are interested in portfolio are comparing it to the libraries listed below
Sorting:
- Code and examples for optical pooled screens (updated protocol).☆14Updated 2 years ago
- Convert .ims to .tif☆14Updated 4 years ago
- ☆15Updated 3 years ago
- Raw data and analysis of scRNA Seq experiments for the paper Multimodal Mapping of the Immune Landscape in Human Pancreatic Cancer. This …☆15Updated 5 years ago
- For fine-tuning Enformer using paired WGS & gene expression data☆26Updated 5 months ago
- Pipeline analysis for whole exome sequencing of pancreatic cancer PDX models☆22Updated 7 years ago
- Examples and code for optical pooled screens☆10Updated 3 years ago
- Decima is a Python library to train sequence models on single-cell RNA-seq data.☆62Updated last week
- "NA Figure": visualization of the missing data distribution☆15Updated 2 years ago
- Computational Biology- Spring 2021☆48Updated 4 years ago
- ☆21Updated 3 years ago
- LLM-powered personalized daily lists of scientific papers☆81Updated 3 weeks ago
- Biological insights into the epigenetic ageing clock☆10Updated 6 years ago
- This Python package will allow you to replicate the experiments from our research on applying Optimal Transport as a similarity metric in…☆43Updated 3 years ago
- ☆102Updated last year
- ☆13Updated 4 years ago
- Fast-ish (and correct!) quantile normalization in Python.☆31Updated 8 months ago
- A Python implementation of the model described in our publication "A convolutional neural network for common-coordinate registration of h…☆25Updated 4 years ago
- 𝒫robabilistic modeling of RNA velocity ⬱☆49Updated this week
- Spatial Multiomics Profiler for Spatial Characterization of Tissue Microenvironment (https://smprofiler.io)☆23Updated last week
- Batch balanced KNN☆177Updated 2 years ago
- GREAT algorithm in Python☆14Updated 3 years ago
- Statistical Inference for Unsupervised Learning☆16Updated last year
- Multi-omics studies are available here☆52Updated 3 years ago
- Probabilistic Alignment of Spatial Transcriptomics Experiments☆100Updated 11 months ago
- A library for full-stack aging clocks design and benchmarking.☆36Updated last year
- A Python-based compendium of GPU-optimized aging clocks.☆119Updated last month
- BERMUDA (Batch Effect ReMoval Using Deep Autoencoders) is a novel transfer-learning-based method for batch correction in scRNA-seq data.☆31Updated 6 years ago
- STREAM2: Fast, scalable, and interactive trajectory analysis of single-cell omics data☆13Updated last year
- Dataloader for applying sequence models to personalized genomics☆28Updated last week