boulderrinnlab / CLASS_2023

Related projects: ⓘ

• crazyhottommy / compbio_tutorials
  My youtube programming scripts
  ☆33Updated last week
• WCSCourses / SingleCell_23
  Hands-on training on the latest methodologies and applications for the analysis of nucleic acids from eukaryotic single cells
  ☆16Updated last month
• NBISweden / workshop-RNAseq
  Workshop • Analysis of RNA-seq data
  ☆33Updated 6 months ago
• Novartis / easyTrackHubs
  This package provides a function to reformat lists of genome coverage files, such as bigWig of bam files, into the directory structure of…
  ☆27Updated 4 months ago
• hamidghaedi / Enrichment-Analysis
  From RNA-seq raw reads to enriched pathways by DEGs
  ☆29Updated 4 months ago
• ucdavis-bioinformatics-training / 2017_2018-single-cell-RNA-sequencing-Workshop-UCD_UCB_UCSF
  2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF
  ☆35Updated 6 years ago
• MangiolaLaboratory / sccomp
  Testing differences in cell type proportions from single-cell data.
  ☆90Updated last week
• simonvh / bioinfosummer
  Tutorial for AMSI BioInfoSummer 2018
  ☆28Updated 5 years ago
• saezlab / transcriptutorial
  This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL
  ☆55Updated last year
• snystrom / memes
  An R interface to the MEME Suite
  ☆43Updated 4 months ago
• hbctraining / publication_perfect
  Six hour hands-on to creating publication-quality plots in R
  ☆23Updated 10 months ago
• GangLiLab / genekitr
  🧬 Gene analysis toolkit based on R
  ☆53Updated last week
• elimereu / matchSCore2
  ☆53Updated 3 years ago
• wmacnair / SampleQC
  Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data
  ☆35Updated last year
• tavareshugo / tutorial_DESeq2_contrasts
  ☆54Updated 4 months ago
• mbassalbioinformatics / CnRAP
  Analytical pipeline developed to anlayze Cut and Run data. Inspired by both Henikoff (SEACR) and Orkin (Cut&RunTools) lab pipelines.
  ☆17Updated 3 years ago
• jsschrepping / r_docker
  Docker container for genomics analyses in R.
  ☆24Updated 4 months ago
• sandberg-lab / Smart-seq3
  Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).
  ☆49Updated 2 years ago
• williamritchie / IRFinder
  Detecting intron retention from RNA-Seq experiments
  ☆52Updated 2 months ago
• haniffalab / scRNA-seq_analysis
  Single cell RNA-seq analysis bundle
  ☆30Updated 5 years ago
• NBISweden / workshop-epigenomics-RTDs
  workshop website on readthedocs
  ☆17Updated this week
• liulab-dfci / MAGeCK
  Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent gen…
  ☆24Updated 3 years ago
• immunogenomics / SCENT
  Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA
  ☆62Updated 2 weeks ago
• kevinblighe / scDataviz
  scDataviz: single cell dataviz and downstream analyses
  ☆60Updated 2 years ago
• jianhong / ATACseqQC
  ATAC-seq Quality Control
  ☆22Updated 4 months ago
• BaderLab / Cytoscape_workflows
  collection of notebooks with different cytoscape workflows
  ☆47Updated last year
• EDePasquale / DoubletDecon
  A tool for removing doublets from single-cell RNA-seq data
  ☆69Updated 3 years ago
• PierreBSC / Viral-Track
  ☆55Updated 4 years ago
• Core-Bioinformatics / bulkAnalyseR
  ☆25Updated 10 months ago
• almeidasilvaf / BioNERO
  Easy and comprehensive biological network reconstruction and analysis
  ☆24Updated 5 months ago