boulderrinnlab / CLASS_2023Links
☆20Updated 2 years ago
Alternatives and similar repositories for CLASS_2023
Users that are interested in CLASS_2023 are comparing it to the libraries listed below
Sorting:
- My youtube programming scripts☆59Updated 11 months ago
- From RNA-seq raw reads to enriched pathways by DEGs☆33Updated last year
- ☆63Updated last year
- Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.☆121Updated 5 years ago
- Generate IGV style locus tracks from bigWig files in R☆175Updated last year
- Basic workflow for ATAC-seq analysis☆92Updated last year
- Visualizing transcript structure and annotation using ggplot2☆163Updated last year
- Tutorial for AMSI BioInfoSummer 2018☆30Updated 7 years ago
- Easily install and load packages from the tidyomics ecosystem☆72Updated last month
- Integrative pathway enrichment analysis of multivariate omics data☆117Updated 5 months ago
- ☆73Updated 3 years ago
- SIB course on single cell transcriptomics by mostly using the Seurat pipeline☆84Updated 4 months ago
- Simplify functional enrichment results☆121Updated last year
- ATAC-seq snakemake pipeline☆88Updated 5 years ago
- RNA-Seq analysis workflow☆105Updated 4 years ago
- ☆56Updated last month
- A single cell RNA-seq workflow, including highly variable gene analysis, cell type assignment and differential expression analysis.☆104Updated 3 years ago
- published papers with a lot of data☆74Updated 8 months ago
- Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)☆75Updated 2 years ago
- SEACR: Sparse Enrichment Analysis for CUT&RUN☆118Updated 2 years ago
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆120Updated 2 weeks ago
- Bayesian mixed-effect model to test differences in cell type proportions from single-cell data, in R☆117Updated last week
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆51Updated 5 years ago
- Links to ATAC-seq analysis tools☆74Updated 4 years ago
- A single cell RNA-seq reference map of human hematopoietic development in the bone marrow, with balanced representation of hematopoietic …☆78Updated 6 months ago
- A pipeline to process m6A-seq data and down stream analysis.☆45Updated 5 years ago
- ☆100Updated 2 months ago
- ☆62Updated 5 years ago
- A list of alternative splicing analysis resources☆46Updated 8 months ago
- Analysis pipeline for CUT&RUN and CUT&TAG experiments that includes QC, support for spike-ins, IgG controls, peak calling and downstream …☆105Updated 3 weeks ago