zhanghaoyang0 / easyliftView external linksLinks
shifts hg19/38 genomic position for feasible input format.
☆12Jun 8, 2023Updated 2 years ago
Alternatives and similar repositories for easylift
Users that are interested in easylift are comparing it to the libraries listed below
Sorting:
- finds rsid with genomic position for feasible input format.☆30Mar 26, 2024Updated last year
- ☆13Nov 30, 2018Updated 7 years ago
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Mar 22, 2019Updated 6 years ago
- ☆15Nov 12, 2017Updated 8 years ago
- ☆23May 11, 2023Updated 2 years ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆28Jul 30, 2025Updated 6 months ago
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆27Sep 2, 2021Updated 4 years ago
- TWAS-pipeline☆24Feb 21, 2021Updated 4 years ago
- My configuration files on macOS☆11Jan 27, 2026Updated 2 weeks ago
- Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform …☆29Jun 18, 2023Updated 2 years ago
- A python framework for inferring demography from tracts of identity by state as reported in PLoS Genetics by Harris and Nielsen (2013)☆15Aug 1, 2013Updated 12 years ago
- functional genomic data integration☆10Sep 22, 2019Updated 6 years ago
- Pair-wise conditional analysis and colocalisation☆42May 2, 2024Updated last year
- R package for creating simulated summary statistics and testing MR methods☆12Sep 2, 2020Updated 5 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42May 2, 2018Updated 7 years ago
- This is a tool to estimate pairwise relatedness from ancient DNA, taking in account contamination, ROH, ascertainment bias.☆14Aug 6, 2024Updated last year
- Estimate Bias Due To Sample Overlap In Mendelian Randomization Studies☆11Sep 1, 2022Updated 3 years ago
- Fast and Efficient Tool to Simulate Summary Statistics from Genome-Wide Association Studies☆12May 21, 2024Updated last year
- Supporting information of 'Single-cell RNA sequencing of a European and an African lymphoblastoid cell line'☆10Feb 27, 2020Updated 5 years ago
- user-friendly pipeline for GWAS fine-mapping☆12Mar 9, 2025Updated 11 months ago
- m(6)A methylation analysis☆10Mar 9, 2019Updated 6 years ago
- This repo is archived, the these workflows are still available in the GATK repository under the scripts directory. The workflows are also…☆11Mar 9, 2020Updated 5 years ago
- Analysis code for Olink CVD1 - HF analysis☆15Aug 14, 2024Updated last year
- Filters for Next Generation Sequencing☆12Oct 31, 2024Updated last year
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆43Jan 20, 2023Updated 3 years ago
- Proteome-Wide Association Study☆50Apr 4, 2021Updated 4 years ago
- Simple template for running snakemake with R☆12Jan 31, 2023Updated 3 years ago
- Single cell Type Enrichment Analysis for Phenotypes (STEAP)☆14Jun 16, 2021Updated 4 years ago
- SingleCell: A Python/Cython Package for Processing Single-Cell RNA-Seq Data.☆11Jan 26, 2018Updated 8 years ago
- ☆10Jun 5, 2021Updated 4 years ago
- We present HRIBO (High-throughput annotation by Ribo-seq), a workflow to enable reproducible and high-throughput analysis of bacterial Ri…☆12May 22, 2025Updated 8 months ago
- vyai – A lightweight CLI tool to interact with the Gemini API from the terminal.☆11Dec 8, 2025Updated 2 months ago
- Patient Intake Form Extraction using llm☆15May 29, 2025Updated 8 months ago
- A highly scalable and accurate inference of gene expression and structure for single-cell transcriptomes using semi-supervised deep learn…☆10May 19, 2021Updated 4 years ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Jun 27, 2023Updated 2 years ago
- Get an answer to a question from multiple backend engine like Google, wolframalpha or DuckDuckGo☆11Dec 9, 2020Updated 5 years ago
- R package that contains plink binaries for windows, mac and linux☆14Oct 14, 2019Updated 6 years ago
- Fine mapping of genes associated with Parkinson's Disease using a variety of methods☆11Mar 7, 2022Updated 3 years ago
- Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)☆10Jan 26, 2026Updated 2 weeks ago