prog4biol / pfb2022Links
Programming for Biology Class @ CSHL 2022
☆14Updated last year
Alternatives and similar repositories for pfb2022
Users that are interested in pfb2022 are comparing it to the libraries listed below
Sorting:
- An information model for representing variant annotations.☆27Updated last week
- A Python package for pharmacogenomics (PGx) research☆82Updated last month
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆107Updated last week
- Collection of cloud-based biomedical data science learning modules funded by the National Institute of General Medical Sciences at the NI…☆84Updated 8 months ago
- ☆190Updated 2 years ago
- Nextflow training material for introductory tutorial☆107Updated 3 years ago
- A structural variation pipeline for short-read sequencing☆201Updated this week
- Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders☆161Updated last month
- GATK RNA-Seq Variant Calling in Nextflow☆138Updated 3 years ago
- Call and score variants from WGS/WES of rare disease patients.☆114Updated this week
- RNA-Seq analysis workflow☆105Updated 4 years ago
- Pipeline to fetch metadata and raw FastQ files from public databases☆186Updated 2 weeks ago
- Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark/bwa-meth + MethylDackel or bwa-mem + rastair☆187Updated 2 weeks ago
- Learning the Variant Call Format☆148Updated 6 months ago
- ☆30Updated 4 months ago
- Tools to convert Illumina IDAT/BPM/EGT/GTC and Affymetrix CEL/CHP files to VCF☆162Updated 5 months ago
- Nextflow training material☆221Updated this week
- Warp Analysis Research Pipelines☆225Updated this week
- GWAS Pipeline for H3Africa☆114Updated 8 months ago
- Match up paired end fastq files quickly and efficiently.☆153Updated last year
- A modular annotation tool for genomic variants☆146Updated last week
- Python Fundamentals for Biologists☆40Updated last year
- Educational materials for learning WDL☆131Updated last year
- Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq☆89Updated last week
- Pangolin is a deep-learning method for predicting splice site strengths.☆85Updated last year
- Annotates variants in MAF with OncoKB annotation.☆141Updated last month
- Bioinformatics and genomics resources☆84Updated last month
- AWS for Bioinformatics Researchers☆184Updated 6 months ago
- Example Nextflow pipelines and programming techniques☆107Updated 4 months ago
- Short lessons from FAS Informatics coffee hour☆154Updated 2 years ago