cooplab / popgen-notesLinks
Population genetics notes
β687Updated 2 years ago
Alternatives and similar repositories for popgen-notes
Users that are interested in popgen-notes are comparing it to the libraries listed below
Sorting:
- π Circular and Rectangular Manhattan Plotβ615Updated 9 months ago
- Accurate sample inference from amplicon data with single nucleotide resolutionβ534Updated last month
- β‘οΈοΈβ‘οΈοΈβ¬ οΈοΈβ‘οΈοΈ Draw gene arrow maps in ggplot2β572Updated 2 weeks ago
- Differential analysis of RNA-Seqβ312Updated 8 months ago
- A grammar of graphics for comparative genomicsβ742Updated 2 months ago
- Lecture Notes on Computational and Mathematical Population Geneticsβ197Updated 4 years ago
- Bioinformatics one liners from Ming Tangβ500Updated 5 years ago
- phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; anβ¦β635Updated last year
- Tutorials on phylogenetic and phylogenomic inferenceβ394Updated 2 years ago
- The Leek group guide to genomics papersβ499Updated 7 years ago
- karyoploteR - An R/Bioconductor package to plot arbitrary data along the genomeβ354Updated 7 months ago
- β382Updated last year
- Near-optimal RNA-Seq quantificationβ715Updated last week
- Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.β483Updated 6 months ago
- Materials for short, half-day workshopsβ343Updated last week
- Differential expression of RNA-seq data using the Negative Binomialβ441Updated last month
- microbiome R packageβ308Updated 5 months ago
- PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a cβ¦β482Updated this week
- A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.β456Updated last year
- Applied Computational Genomics Course at UU: Spring 2020β1,073Updated last year
- A tool to find sequencing data and metadata from public databases.β592Updated last year
- Bayesian haplotype-based genetic polymorphism discovery and genotyping.β860Updated 8 months ago
- Tools to work with variant call format filesβ265Updated 3 months ago
- β405Updated 4 years ago
- Code, unit tests, and tutorials for running PICRUSt2β377Updated 2 months ago
- A list of interesting genome browser and genome visualization programsβ1,043Updated this week
- Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Immβ¦β275Updated 2 weeks ago
- A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBSβ¦β536Updated last week
- RSEM: accurate quantification of gene and isoform expression from RNA-Seq dataβ459Updated last year
- Source for the QIIME 2 Framework (Q2F).β527Updated last week