cooplab / popgen-notesLinks
Population genetics notes
☆670Updated 2 years ago
Alternatives and similar repositories for popgen-notes
Users that are interested in popgen-notes are comparing it to the libraries listed below
Sorting:
- Lecture Notes on Computational and Mathematical Population Genetics☆191Updated 4 years ago
- A grammar of graphics for comparative genomics☆684Updated 4 months ago
- ➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2☆551Updated last month
- Accurate sample inference from amplicon data with single nucleotide resolution☆505Updated 2 months ago
- Bioinformatics one liners from Ming Tang☆486Updated 4 years ago
- 📊 Circular and Rectangular Manhattan Plot☆577Updated 2 months ago
- microbiome R package☆300Updated 6 months ago
- Tutorials on phylogenetic and phylogenomic inference☆386Updated last year
- Differential expression of RNA-seq data using the Negative Binomial☆394Updated 3 weeks ago
- phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; an…☆615Updated last year
- Materials for short, half-day workshops☆334Updated last month
- The Leek group guide to genomics papers☆489Updated 6 years ago
- karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome☆317Updated 3 weeks ago
- Genomic Data Retrieval with R☆222Updated 4 months ago
- Differential analysis of RNA-Seq☆304Updated last month
- ☆392Updated 3 years ago
- Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.☆466Updated last month
- Genome Association Predict Integrate Tools☆204Updated last week
- Bioconductor cheat sheet☆189Updated 10 months ago
- PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a c…☆458Updated this week
- Publication-ready volcano plots with enhanced colouring and labeling☆433Updated last year
- Tools to work with variant call format files☆259Updated 4 months ago
- Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis☆312Updated last year
- Codebook from my GWAS cookbook☆192Updated 3 years ago
- Phylogenetic orthology inference for comparative genomics☆778Updated 8 months ago
- Fast Gene Set Enrichment Analysis☆405Updated this week
- Code, unit tests, and tutorials for running PICRUSt2☆361Updated 2 months ago
- A simple gene co-expression analyses workflow powered by tidyverse and graph analyses☆205Updated 11 months ago
- A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS…☆511Updated 3 months ago
- Unix, R and python tools for genomics and data science☆1,287Updated 3 months ago