DavisLaboratory / msImputeLinks
Methods for label-free mass spectrometry proteomics 
☆15Updated 7 months ago
Alternatives and similar repositories for msImpute
Users that are interested in msImpute are comparing it to the libraries listed below
Sorting:
- DEP package☆28Updated 3 years ago
- R package for analysing proteomics data☆50Updated 2 years ago
- Using R and Bioconductor packages for the analysis and comprehension of proteomics data.☆97Updated 2 months ago
- An S3 data object and framework for common quantitative proteomic analyses☆47Updated 4 months ago
- An R interface to enrichR☆93Updated 8 months ago
- NAguideR: performing and prioritizing missing value imputations for consistent bottom-up proteomic analyses☆48Updated 2 months ago
- Tools for manipulating annotated data matrices☆92Updated 4 years ago
- R package - MSstats☆86Updated 2 weeks ago
- An r package for proteomics data Analysis, developed from DEP.☆31Updated 7 months ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆98Updated last year
- Updated implementation of the GSEA-P R application for modern R distributions☆97Updated 3 years ago
- The repo for LFQ-Analyst☆30Updated last year
- Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/☆21Updated 2 years ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆62Updated 2 weeks ago
- Mixed-effect model to test differences in cell type proportions from single-cell data, in R☆112Updated this week
- Tunable Approach for Median Polish of Ratio -- Biological Abundance Batch Effect Removal☆31Updated 5 months ago
- DEqMS is a tool for quantitative proteomic analysis☆24Updated 6 months ago
- Repository for the R package EPIC, to Estimate the Proportion of Immune and Cancer cells from bulk gene expression data.☆84Updated 2 years ago
- Differential Expression Analysis tool box R lang package for omics data☆46Updated 2 weeks ago
- Content for the OSCA Book.☆66Updated 2 years ago
- Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.☆25Updated 4 months ago
- Simplify functional enrichment results☆118Updated last year
- R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …☆29Updated 3 months ago
- tidymass☆58Updated last month
- scDataviz: single cell dataviz and downstream analyses☆63Updated 4 years ago
- iCellR is an interactive R package designed to facilitate the analysis and visualization of high-throughput single-cell sequencing data. …☆123Updated this week
- Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.☆121Updated 5 years ago
- A tool for large scale omics datasets evaluation☆25Updated 2 years ago
- ☆27Updated 4 years ago
- Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.☆92Updated 10 months ago