Confidence Estimation for Mass Spectrometry Proteomics
☆14Jun 21, 2026Updated last week
Alternatives and similar repositories for crema
Users that are interested in crema are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Peptide Correlation analysis☆11Oct 3, 2024Updated last year
- The Interactive Peptide Spectral Annotator☆23Jun 9, 2020Updated 6 years ago
- Interpretation of proteomics identification results☆55May 8, 2026Updated last month
- Tools for treatment high res mass spectrum of natural organic matter samples☆13Aug 4, 2023Updated 2 years ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆52Jun 19, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆29Aug 16, 2023Updated 2 years ago
- A package to cluster and visualise MS/MS spectral data☆11Feb 26, 2021Updated 5 years ago
- Brings Orbitrap mass spectrometry data to life; multi-platform, fast and colorful R package☆37May 1, 2024Updated 2 years ago
- A deep learning toolkit for mass spectrometry☆95May 31, 2026Updated last month
- AutoRT: Peptide retention time prediction using deep learning☆30Jul 31, 2024Updated last year
- Junction centric alternative splicing translator☆22May 22, 2026Updated last month
- A comprehensive R package for label-free proteomics data analysis and modeling☆16May 7, 2026Updated last month
- Automated pipeline for whole bacterial genome analysis based on snakemake☆12May 16, 2022Updated 4 years ago
- Post-processing peptide de novo sequences to improve their accuracy☆10Nov 29, 2022Updated 3 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Fundamental functions, annotation pipeline and constants for oktoberfest☆13Jun 11, 2026Updated 2 weeks ago
- This is a R package for alignment of DIA mass-spec data☆12Jan 31, 2026Updated 5 months ago
- Processing and analysis of proteomics data☆17Updated this week
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆36Jun 13, 2026Updated 2 weeks ago
- De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model☆189Updated this week
- Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful fo…☆93Aug 17, 2023Updated 2 years ago
- Matthew The's implementation of MaRaCluster☆11Jun 26, 2025Updated last year
- Proteomics Toolset for Integrative Data Analysis☆26Oct 7, 2025Updated 8 months ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆31Jun 5, 2026Updated 3 weeks ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Python package for efficient mass spectrometry data processing and visualization☆169Mar 5, 2026Updated 3 months ago
- ☆31Jun 15, 2026Updated 2 weeks ago
- Analysis platform for large-scale dose-dependent data☆29Nov 25, 2025Updated 7 months ago
- DeepLC: Retention time prediction for peptides carrying any modification.☆79Jun 22, 2026Updated last week
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆26Jun 5, 2026Updated 3 weeks ago
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆71Jan 6, 2026Updated 5 months ago
- ☆11Oct 8, 2021Updated 4 years ago
- A small library to provide peak picking for software processing mass spectrometry data☆24Apr 17, 2026Updated 2 months ago
- Simple Python interface to CoverM's fast coverage estimation functions☆11Dec 20, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆19Apr 16, 2026Updated 2 months ago
- The ProteoWizard Library is a set of software libraries and tools for rapid development of mass spectrometry and proteomic data analysis …☆308Updated this week
- An agile visualization dashboard for R☆19Oct 8, 2021Updated 4 years ago
- ☆11Aug 10, 2023Updated 2 years ago
- SquiggleKit: A toolkit for manipulating nanopore signal data☆128Feb 16, 2024Updated 2 years ago
- Best Practices in Naming for Software Development☆32Jun 20, 2026Updated last week
- StrainXpress is a de novo assembly method which base on overlap-layout-consensus (OLC) paradigm and can fast and accurately assemble high…☆13Mar 7, 2024Updated 2 years ago