michaelmarty / MassSpecCodingClub
A community dedicated to education of computer coding applied to mass spectrometry applications.
☆51Updated last year
Alternatives and similar repositories for MassSpecCodingClub:
Users that are interested in MassSpecCodingClub are comparing it to the libraries listed below
- Instrument Application Programming Interface☆45Updated 3 weeks ago
- ☆54Updated last week
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆80Updated 4 months ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆43Updated this week
- GlyCombo, a combinatorial glycan composition assignment tool☆12Updated 2 weeks ago
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆81Updated last week
- Matthew The's implementation of MaRaCluster☆11Updated 2 years ago
- ☆25Updated last year
- ☆15Updated 3 years ago
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆64Updated last year
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆84Updated 2 months ago
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆47Updated last week
- Rescoring and spectral library generation pipeline for proteomics.☆39Updated last month
- Democratizing ML in proteomics☆34Updated last week
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆27Updated this week
- Fast and flexible semi-supervised learning for peptide detection in Python☆43Updated this week
- ☆35Updated last week
- Deep learning framework for proteomics☆116Updated this week
- FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks☆36Updated 2 weeks ago
- .NET DLL wrapper for reading Thermo .Raw files. Uses ThermoFisher.CommonCore NuGet packages provided by Thermo Fisher Scientific☆38Updated 5 months ago
- Mass spectrometry data visualization☆36Updated 4 years ago
- ☆13Updated 11 months ago
- asari, metabolomics data preprocessing☆45Updated last week
- mzTab Reporting MS-based Proteomics and Metabolomics Results☆39Updated 3 months ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆26Updated last month
- Workflow solutions for mass-spectrometry based non-target analysis.☆65Updated this week
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆58Updated last week
- Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics☆112Updated 8 months ago
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆25Updated this week