michaelmarty / MassSpecCodingClubLinks
A community dedicated to education of computer coding applied to mass spectrometry applications.
☆52Updated 3 months ago
Alternatives and similar repositories for MassSpecCodingClub
Users that are interested in MassSpecCodingClub are comparing it to the libraries listed below
Sorting:
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆65Updated 2 years ago
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆98Updated last month
- Instrument Application Programming Interface☆51Updated last month
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆86Updated 2 months ago
- asari, metabolomics data preprocessing☆55Updated 3 weeks ago
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆91Updated 2 weeks ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆31Updated 3 weeks ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆49Updated this week
- ☆27Updated 2 years ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆48Updated 8 months ago
- Rescoring and spectral library generation pipeline for proteomics.☆52Updated 3 weeks ago
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆30Updated 11 months ago
- ☆15Updated 3 years ago
- Democratizing ML in proteomics☆44Updated last week
- Python Package for the downstream analysis of mass-spectrometry-based proteomics data☆76Updated this week
- ☆63Updated 7 months ago
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆70Updated last month
- This is a collection of minimal code to visualize various aspects of proteomics data.☆83Updated 3 years ago
- Reporting and exchange format for mass spectrometry quality control data☆31Updated last week
- ☆43Updated 8 months ago
- ☆20Updated 9 months ago
- Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics☆122Updated 4 months ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆24Updated last month
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆29Updated 2 weeks ago
- Thermo RAW file parser that runs on Linux/Mac and all other platforms that support Mono☆228Updated 2 weeks ago
- Public Workflows at GNPS☆64Updated last year
- A programmable and modular LC/MS simulator in Python☆23Updated last month
- FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks☆40Updated 4 months ago
- Thermo MSFileReader Python bindings☆69Updated 4 years ago
- Streamlining Mass Spectrometry Data Visualization with Pandas☆20Updated last week