michaelmarty / MassSpecCodingClubLinks
A community dedicated to education of computer coding applied to mass spectrometry applications.
☆52Updated 5 months ago
Alternatives and similar repositories for MassSpecCodingClub
Users that are interested in MassSpecCodingClub are comparing it to the libraries listed below
Sorting:
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆98Updated 3 months ago
- asari, metabolomics data preprocessing☆56Updated 3 weeks ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆50Updated last week
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆32Updated 2 months ago
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆92Updated 3 weeks ago
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆90Updated last month
- Python Package for the downstream analysis of mass-spectrometry-based proteomics data☆79Updated last month
- Instrument Application Programming Interface☆51Updated 2 months ago
- DeepLC: Retention time prediction for peptides carrying any modification.☆72Updated 2 weeks ago
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆66Updated last week
- Democratizing ML in proteomics☆51Updated 3 weeks ago
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆31Updated last year
- GlyCombo, a combinatorial glycan composition assignment tool☆12Updated last month
- Deep learning framework for proteomics☆140Updated last week
- ☆44Updated 9 months ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆24Updated 2 months ago
- ☆30Updated 2 years ago
- ☆15Updated 3 years ago
- This is a collection of minimal code to visualize various aspects of proteomics data.☆82Updated 3 years ago
- ☆65Updated 9 months ago
- Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics☆123Updated this week
- Thermo RAW file parser that runs on Linux/Mac and all other platforms that support Mono☆233Updated last month
- Fast and flexible semi-supervised learning for peptide detection in Python☆49Updated 9 months ago
- Rescoring and spectral library generation pipeline for proteomics.☆52Updated last week
- Thermo MSFileReader Python bindings☆69Updated 4 years ago
- ☆21Updated 10 months ago
- FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks☆42Updated 6 months ago
- HUPO-PSI mass spectrometry CV☆39Updated last week
- Streamlining Mass Spectrometry Data Visualization with Pandas☆20Updated this week
- Mass spectrometry data visualization☆37Updated 5 years ago