A community dedicated to education of computer coding applied to mass spectrometry applications.
☆51Jul 18, 2025Updated last year
Alternatives and similar repositories for MassSpecCodingClub
Users that are interested in MassSpecCodingClub are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Brings Orbitrap mass spectrometry data to life; multi-platform, fast and colorful R package☆37May 1, 2024Updated 2 years ago
- Differential Expression Analysis tool box R lang package for omics data☆46Aug 11, 2026Updated 2 weeks ago
- PhosR is a package for the comprehensive analysis of phosphoproteomic data.☆21Jun 8, 2026Updated 2 months ago
- An R package for correcting p-values for multiple hypothesis testing in comparative quantitative omics experiments using permutation-base…☆13Mar 11, 2026Updated 5 months ago
- Matthew The's implementation of MaRaCluster☆11Jun 26, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆15Jan 27, 2022Updated 4 years ago
- Fundamental functions, annotation pipeline and constants for oktoberfest☆13Updated this week
- A programmable and modular LC/MS simulator in Python☆25Jul 3, 2026Updated last month
- MSConnect is a Web-based integrated plateform to combine data storage/backup, process and visualization of MS-based Proteomics data.☆20Aug 19, 2025Updated last year
- This project is created by the Hao Lab at the Department of Chemistry & Biochemistry, University of Maryland, College Park, MD. This proj…☆36Jul 3, 2026Updated last month
- A Rust library for peptide centric mass spec calculations centered around PSI standards and handling complex cases robustly☆51Aug 17, 2026Updated last week
- ☆11Nov 30, 2024Updated last year
- This repository attempts to implement a neural net that leverages the transformer architecture to predict peptide properties (retention t…☆10Nov 22, 2024Updated last year
- Quantitative features for mass spectrometry data☆29May 3, 2026Updated 3 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A package to cluster and visualise MS/MS spectral data☆11Feb 26, 2021Updated 5 years ago
- This python module allows to extract data from the RAW-file-format produces by devices from Thermo Fisher Scientific.☆23Dec 30, 2024Updated last year
- StatsPro : systematic integration and evaluation of statistical approaches for detecting differential expression in label-free quantitat…☆13Mar 13, 2022Updated 4 years ago
- R package for functionally scoring phosphorylation sites☆22Nov 3, 2019Updated 6 years ago
- Python package for efficient mass spectrometry data processing and visualization☆169Aug 18, 2026Updated last week
- HUPO-PSI Standardized peptidoform notation☆26Aug 14, 2026Updated 2 weeks ago
- A cross-platform proteomics data analysis suite☆317Aug 7, 2026Updated 3 weeks ago
- A python package for fast post translational modification localization, powered by Cython.☆21Dec 15, 2023Updated 2 years ago
- Post Translational Modification (PTM) Significance Analysis in shotgun mass spectrometry-based proteomic experiments☆16Jul 30, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Python notebooks for teaching analytical chemistry☆15Updated this week
- A deep learning toolkit for mass spectrometry☆95Aug 16, 2026Updated 2 weeks ago
- MALDIpy: a Python package for single-cell analysis of imaging mass spectrometry data (Cell Metabolism 2024)☆21Jun 12, 2024Updated 2 years ago
- Web Molecular Toolkit: cheminformatics functionality in TypeScript☆38Jun 28, 2026Updated 2 months ago
- Post-processing peptide de novo sequences to improve their accuracy☆10Nov 29, 2022Updated 3 years ago
- Repo hosting the MetFrag website☆11Apr 6, 2026Updated 4 months ago
- Multiplexed data-independent acquisition (plexDIA) for increasing proteomics throughput. The code is distributed by an MIT license.☆11Mar 17, 2025Updated last year
- RawQuant is a Python package for extracting scan meta data and quantification values from Thermo .raw files.☆11Jan 4, 2019Updated 7 years ago
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆25Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A declarative API for writing XML documents for HUPO PSI-MS mzML and mzIdentML☆26Aug 8, 2026Updated 3 weeks ago
- This is a R package for alignment of DIA mass-spec data☆12Jan 31, 2026Updated 6 months ago
- Access Orbitrap data in R lang using C# .NET assembly - bioconductor package☆62Feb 10, 2026Updated 6 months ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆25Aug 19, 2026Updated last week
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆82Aug 15, 2026Updated 2 weeks ago
- ☆35Updated this week
- Python package for investigating the structural context of PTMs☆29Jan 9, 2025Updated last year