Genome engineering and analysis software
☆46Jun 21, 2022Updated 4 years ago
Alternatives and similar repositories for millstone
Users that are interested in millstone are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A tool to examine duplicate read characteristics in a BAM file☆12Dec 8, 2017Updated 8 years ago
- A succinct colored dBG representation☆12Sep 11, 2018Updated 7 years ago
- A configurable de novo assembly pipeline☆30Jun 29, 2016Updated 10 years ago
- An MPI Toolkit for large-scale genomic analysis☆16Feb 29, 2016Updated 10 years ago
- Copy number estimation of highly duplicated sequences☆10Aug 15, 2017Updated 9 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Index and query k-mer matrices in BGZF☆12Apr 30, 2018Updated 8 years ago
- Blacktie: a streamlined interface to the popular tophat/cufflinks RNA-seq pipeline☆26Oct 5, 2015Updated 10 years ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆32Oct 9, 2017Updated 8 years ago
- Haplotype-based somatic genome simulator☆10Apr 20, 2026Updated 4 months ago
- ☆12Feb 19, 2017Updated 9 years ago
- profile the repeat landscape in a genome☆16Sep 9, 2014Updated 11 years ago
- Homebrew repository for CloudBioLinux: incubator for formulas to end up in homebrew-science☆19Oct 17, 2016Updated 9 years ago
- Faster manipulation of dendrogram objects in R.☆15May 22, 2015Updated 11 years ago
- Flexible Integration of Data with Deep LEarning☆51Mar 24, 2023Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆25Aug 17, 2016Updated 10 years ago
- Shape analysis of high-throughput data☆19Feb 24, 2016Updated 10 years ago
- Fast but inaccurate adapter trimmer for Illumina reads☆16Mar 17, 2022Updated 4 years ago
- Linked-Read Alignment Tool☆26May 16, 2019Updated 7 years ago
- A small repo for storing the code for making the files and html for CCRs.☆22Oct 22, 2019Updated 6 years ago
- Rapid and robust analysis of RNA-Seq experiments.☆32Apr 16, 2016Updated 10 years ago
- Manage the visualization of large amounts of other people's [often messy] genomics data☆18Apr 10, 2016Updated 10 years ago
- User-friendly Bioinformatics Tools☆18Mar 5, 2021Updated 5 years ago
- Bring Your Own Bioinformatics☆27Apr 28, 2016Updated 10 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ChIP-seq peak calling with GC effects adjustment☆10Jul 5, 2018Updated 8 years ago
- Response to blog post about Salmon☆37Sep 3, 2017Updated 8 years ago
- An integrated high performance bioinformatics toolkit☆23Apr 24, 2019Updated 7 years ago
- Course materials for the edX Data Analysis for Genomics☆36May 23, 2015Updated 11 years ago
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11May 21, 2026Updated 3 months ago
- ☆13Sep 11, 2025Updated 11 months ago
- Rapid competitive read demulitplexer. Made with tries.☆23May 19, 2025Updated last year
- variant discovery and annotation using GATK and Ensembl☆17Jun 27, 2013Updated 13 years ago
- String search using the Burrows-Wheeler transform☆19Dec 15, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- TFFM framework☆13Sep 22, 2025Updated 11 months ago
- Seeking information like heteroplasmy, structure variants, etc. on Mitochondrial genome from next generation sequencing☆41Dec 11, 2018Updated 7 years ago
- Simple visualisation tool for sequences' similarity in bioinformatics☆13Apr 12, 2018Updated 8 years ago
- An algorithm for clonal tree reconstruction from multi-sample cancer sequencing data☆14Apr 1, 2018Updated 8 years ago
- Fast, Accurate, and Complete SSR Detection in Genomic Sequences☆11Jun 29, 2020Updated 6 years ago
- MOODS: Motif Occurrence Detection Suite☆118May 16, 2023Updated 3 years ago
- Training material for intermediate R / Bioconductor courses☆17Mar 15, 2023Updated 3 years ago