☆12Jul 30, 2022Updated 4 years ago
Alternatives and similar repositories for SCUBA
Users that are interested in SCUBA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Robust and scalable inference of cell lineages via consensus clustering. Features novel algorithms for the comparison of weighted graphs …☆14Jan 16, 2017Updated 9 years ago
- GiniClust: Detecting Rare Cell Types from Single-Cell Gene Expression Data with Gini Index☆36Jun 18, 2018Updated 8 years ago
- Wishbone is an algorithm to align cells along developmental trajectories with branches☆42Feb 8, 2020Updated 6 years ago
- Shape analysis of high-throughput data☆19Feb 24, 2016Updated 10 years ago
- YARN: Robust Multi-Tissue RNA-Seq Preprocessing and Normalization☆13Mar 4, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data☆53Jul 12, 2018Updated 8 years ago
- This repository is retired software☆14Oct 29, 2015Updated 11 years ago
- A tool to examine duplicate read characteristics in a BAM file☆12Dec 8, 2017Updated 8 years ago
- Metagenomics Pipeline Repository for January, 2015 NCBI/ADDS Hackathon at NIH☆10Oct 31, 2016Updated 10 years ago
- R package for annotating metagenomic datasets with taxonomic information☆10Feb 11, 2020Updated 6 years ago
- Simulation and power calculations for time-to-event trials☆18May 21, 2020Updated 6 years ago
- A birth-death-hybridization based phylogenetic network simulator.☆11Oct 2, 2024Updated 2 years ago
- Faster manipulation of dendrogram objects in R.☆15May 22, 2015Updated 11 years ago
- Beta-Poisson model for single-cell RNA-seq data analyses☆18Feb 8, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- under construction☆14Apr 20, 2017Updated 9 years ago
- COmplex Network Description Of Regulators, an R package for bipartite network analysis☆12Jul 5, 2019Updated 7 years ago
- The JunctionSeq R package is a powerful tool for testing and visualizing differential usage of exons and splice junctions in next-generat…☆30May 19, 2017Updated 9 years ago
- ☆16Jun 22, 2026Updated 4 months ago
- Deep Zoom Image Downloader☆22May 8, 2026Updated 5 months ago
- Implementation of Mapper Algorithm☆14Dec 19, 2016Updated 9 years ago
- Memory efficient clustering in R for large datasets☆22Aug 22, 2022Updated 4 years ago
- Reconstructing single-cell lineage history using mitochondrial mutation drift dynamics☆13Aug 22, 2026Updated 2 months ago
- ☆12May 24, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Gene expression deconvolution using dampened weighted least squares☆38Feb 4, 2021Updated 5 years ago
- PHP-and-MySQL-Web-Development-5th-Edition☆13Mar 18, 2018Updated 8 years ago
- ☆15Sep 23, 2025Updated last year
- Iteratively Adjusted Surrogate Variable Analysis☆10Aug 23, 2021Updated 5 years ago
- Mostly useful scripts and files for processing MiSeq amplicon data☆20Jul 1, 2016Updated 10 years ago
- R package for working with CyToF data☆26May 11, 2020Updated 6 years ago
- Rare cell identification tool for single cell datasets☆23Jun 14, 2022Updated 4 years ago
- Attraction-Repulsion Spectrum in Neighbor Embeddings☆32Sep 24, 2022Updated 4 years ago
- scLVM is a modelling framework for single-cell RNA-seq data that can be used to dissect the observed heterogeneity into different sources…☆112Dec 16, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- An R package for creating 3D barplots☆12Jan 8, 2023Updated 3 years ago
- Imputing dropout events in single-cell RNA-sequencing data☆18Dec 7, 2020Updated 5 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆33Jan 15, 2021Updated 5 years ago
- Single cell interactive plotting tools☆25Jun 12, 2020Updated 6 years ago
- R package for the analysis of single cell virology growth curves☆10Jan 31, 2023Updated 3 years ago
- SPADE: Spanning Tree Progression of Density Normalized Events☆49Aug 23, 2016Updated 10 years ago
- Inference of switch-like differential expression along single-cell trajectories☆23Oct 24, 2017Updated 9 years ago