Alternatives and similar repositories for presentations

Users that are interested in presentations are comparing it to the libraries listed below

• peterjc / picobio
  Miscellaneous Bioinformatics scripts etc mostly in Python
  ☆45Updated 2 weeks ago
• lh3 / bfc
  High-performance error correction for Illumina resequencing data
  ☆73Updated 9 years ago
• slzhao / QC3
  QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.
  ☆32Updated 9 years ago
• wdecoster / nano-snakemake
  A snakemake pipeline for SV analysis from nanopore genome sequencing
  ☆52Updated 5 years ago
• Cibiv / Teaser
  A tool to benchmark mappers and different parameters within minutes
  ☆44Updated 6 years ago
• sequencing / NxTrim
  Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.
  ☆53Updated 7 years ago
• melbournebioinformatics / variant_calling_pipeline
  A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL. This version of the pipeline uses the Rubra/Ruffus framewor…
  ☆34Updated 11 years ago
• arq5x / bedtools-protocols
  ☆78Updated 11 years ago
• bioinform / metasv
  MetaSV: An accurate and integrative structural-variant caller for next generation sequencing
  ☆58Updated 8 years ago
• walaj / VariantBam
  Filtering and profiling of next-generational sequencing data using region-specific rules
  ☆79Updated 2 years ago
• mcfrith / last-rna
  ☆49Updated 2 years ago
• tk2 / RetroSeq
  RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…
  ☆67Updated 3 years ago
• vibansal / hapcut
  program for haplotype phasing from sequence reads and related tools
  ☆25Updated 6 years ago
• dzerbino / oases
  De novo transcriptome assembler for short reads
  ☆64Updated 7 years ago
• dantaki / SV2
  Support Vector Structural Variation Genotyper
  ☆58Updated 5 years ago
• ngsutils / ngsutils
  Tools for next-generation sequencing analysis
  ☆89Updated 6 years ago
• TGAC / NanoOK
  Analysis tool for Nanopore sequencing data
  ☆34Updated 6 years ago
• riverlee / MitoSeek
  Seeking information like heteroplasmy, structure variants, etc. on Mitochondrial genome from next generation sequencing
  ☆41Updated 6 years ago
• arq5x / nanopore-scripts
  Various scripts and recipes for working with nanopore data
  ☆34Updated 9 years ago
• inodb / snakemake-workflows
  An experimental repo for common snakemake rules and workflows
  ☆46Updated 10 years ago
• benedictpaten / marginAlign
  UCSC Nanopore
  ☆44Updated 6 years ago
• jason-weirather / AlignQC
  Long read alignment analysis. Generate a reports on sequence alignments for mappability vs read sizes, error patterns, annotations and r…
  ☆49Updated 7 years ago
• cc2qe / vawk
  An awk-like VCF parser
  ☆56Updated last year
• aquaskyline / LRSIM
  10x Genomics Reads Simulator
  ☆46Updated last year
• jgurtowski / nanocorr
  Error correction for Oxford Nanopore data
  ☆47Updated 4 years ago
• hopkinsmarinestation / Population-Genomics-via-RNAseq
  Guide to transcriptome assembly & analysis
  ☆21Updated 8 years ago
• TheJacksonLaboratory / SVE
  ☆51Updated 6 years ago
• vsbuffalo / bioawk-tutorial
  ☆44Updated 12 years ago
• tanghaibao / quota-alignment
  Guided synteny alignment between duplicated genomes (within specified quota constraint)
  ☆59Updated 8 years ago
• everestial / VCF-Simplify
  A python parser to simplify and build the VCF (Variant Call Format).
  ☆49Updated last year