☆24Oct 15, 2018Updated 7 years ago
Alternatives and similar repositories for SCITE
Users that are interested in SCITE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆25Mar 3, 2020Updated 6 years ago
- A robust PCA method of tumor clone and evolution inference from single-cell sequencing data.☆12May 28, 2020Updated 5 years ago
- CellPhy: accurate and fast probabilistic inference of single-cell phylogenies☆20Jan 8, 2026Updated 4 months ago
- Model-based Dimensionality Reduction for Single-cell RNA-seq with Generalized Bilinear Models☆16Jul 29, 2025Updated 9 months ago
- SCCNV: a software tool for identifying copy number variation from single-cell whole-genome sequencing☆13Jul 21, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A local realigner around InDels for MethylSeq data☆12Apr 28, 2016Updated 10 years ago
- Jitterbug is a bioinformatic software that predicts insertion sites of transposable elements in a sample sequenced by short paired-end re…☆17Jan 23, 2017Updated 9 years ago
- for detecting internal tandem duplication from genome sequence data.☆12May 16, 2019Updated 7 years ago
- LACE 2.0 is a new release of the LACE R Bioconductor package, which provides an interactive user interface to perform clonal evolution an…☆15Apr 7, 2026Updated last month
- Pipeline for processing of GoT-ChA genotyping data and downstream analysis☆15Mar 17, 2025Updated last year
- Isoform-level expression patterns in single-cell RNA-sequencing data☆12Apr 20, 2023Updated 3 years ago
- Code repository for macsGESTALT single cell lineage tracing analysis https://doi.org/10.1101/2020.08.11.245787☆10May 10, 2021Updated 5 years ago
- scRNA-seq analysis beyond gene annotations using transcriptionally active regions (TARs) generated from sequence alignment data☆10Jul 25, 2022Updated 3 years ago
- WGS Pipeline☆13Jan 19, 2018Updated 8 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆13Jul 28, 2023Updated 2 years ago
- Identify major cellular signals in bulk transcriptomes☆11Jun 1, 2022Updated 3 years ago
- Construction of small-world, scale-free networks☆16Mar 16, 2017Updated 9 years ago
- Analysis of co-expression networks from RNA-seq data☆11Apr 6, 2017Updated 9 years ago
- Single-cell COPy number Estimation☆18Dec 11, 2022Updated 3 years ago
- Single Cell Caller (SCcaller) - Identify single nucleotide variations (SNVs) from single cell sequencing data☆38Nov 27, 2024Updated last year
- Tertiary analysis package to visualize single-cell data generated by the Tapestri Platform.☆18Updated this week
- ☆35Jun 7, 2019Updated 6 years ago
- Processing scripts for single cell DNA sequencing on the Tapestri platform☆24Apr 11, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Base-wise aggregation and functional prediction for human non-coding regulatory variants☆15Dec 20, 2023Updated 2 years ago
- Notes for getting to know the Julia programming language in one day.☆38Feb 19, 2022Updated 4 years ago
- R wrapper for utilizing the SigProfilerMatrixGenerator framework☆20Jan 29, 2026Updated 3 months ago
- MPBoot: Fast phylogenetic maximum parsimony tree inference and bootstrap approximation☆21Dec 4, 2024Updated last year
- A Cytoscape.js extension for the hierarchical clustering algorithm☆10Jul 26, 2017Updated 8 years ago
- Anatomogram illustrating Expression Atlas experiments☆54Jul 30, 2020Updated 5 years ago
- Bayesian non-parametric clustering (BnpC) of binary data with missing values and uneven error rates☆22Jul 11, 2024Updated last year
- Plot allele frequencies in VCF files☆11Apr 13, 2026Updated last month
- ☆18Feb 25, 2022Updated 4 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- A front end for elasticsearch written in plotly dash☆10Nov 9, 2023Updated 2 years ago
- deTS☆18Apr 21, 2020Updated 6 years ago
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆13Jul 12, 2024Updated last year
- ☆21Updated this week
- A Linux CPU temperature terminal monitor with history charts.☆13Nov 20, 2015Updated 10 years ago
- Data Structures for Bioinformatics - LM Bioinformatics - University of Rome Tor Vergata☆12Feb 27, 2026Updated 2 months ago
- Collection of code for the GESTALT fate mapping paper using the CRISPR/Cas9 system☆24Jan 8, 2018Updated 8 years ago