Alternatives and similar repositories for concise:

Users that are interested in concise are comparing it to the libraries listed below

• kundajelab / dfim
  Deep Feature Interaction Maps (DFIM)
  ☆53Updated 6 years ago
• jpiper / pyDNase
  Python module for the easy handling and analysis of DNase-seq data
  ☆37Updated 5 years ago
• kundajelab / genomelake
  Simple and efficient access to genomic data for deep learning models.
  ☆43Updated 5 years ago
• uci-cbcl / FactorNet
  A deep learning package for predicting TF binding
  ☆42Updated 5 years ago
• maximilianh / crisporPaper
  Code for the CRISPOR article, all data and code to create figures and analysis
  ☆40Updated 8 years ago
• babelomics / babelomics
  ☆41Updated 6 years ago
• kundajelab / ChromDragoNN
  Code for the paper "Integrating regulatory DNA sequence and gene expression to predict genome-wide chromatin accessibility across cellula…
  ☆44Updated 3 years ago
• thucombio / deepnet-rbp
  ☆20Updated 9 years ago
• ueser / FIDDLE
  Flexible Integration of Data with Deep LEarning
  ☆50Updated 2 years ago
• kundajelab / coda
  Coda: a convolutional denoising algorithm for genome-wide ChIP-seq data
  ☆33Updated 7 years ago
• bioFAM / slalom
  ☆28Updated 2 years ago
• jbkinney / mavenn
  MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect
  ☆27Updated 3 weeks ago
• SchulzLab / EpigenomicsTutorial-ISMB2017
  Repository for the Epigenomics Tutorial hold at ISMB 2017 in Prague
  ☆14Updated 4 years ago
• de-Boer-Lab / CisRegModels
  Scripts for building computational models of gene regulation with tensorflow
  ☆27Updated 2 years ago
• lucapinello / Haystack
  Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline
  ☆30Updated 7 years ago
• yanailab / moana
  Moana: Robust cell type classification of single-cell RNA-Seq data
  ☆24Updated 6 years ago
• andreaskapou / BPRMeth
  Modelling DNA methylation profiles
  ☆23Updated 4 years ago
• p-koo / learning_sequence_motifs
  "Representation Learning of Genomic Sequence Motifs with Convolutional Neural Networks" by Peter K. Koo and Sean R. Eddy
  ☆33Updated 5 years ago
• kundajelab / simdna
  A python library for creating simulated regulatory DNA sequences
  ☆38Updated 2 years ago
• stracquadaniolab / pygna
  A Python package for gene network analysis
  ☆32Updated 2 years ago
• shwhalen / ml-pitfalls
  Notebooks accompanying the paper "Navigating the pitfalls of applying machine learning in genomics"
  ☆45Updated last year
• hclimente / smartas
  📓Notebook of Climente-González et al. (2017), The Functional Impact of Alternative Splicing in Cancer.
  ☆14Updated 7 years ago
• epaull / TieDIE
  Tied Diffusion for Subnetwork Discovery (TieDIE)
  ☆37Updated 3 years ago
• SchulzLab / TEPIC
  Annotation of genomic regions using transcription factor binding sites and epigenetic data
  ☆40Updated 3 years ago
• mandricigor / imrep
  ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.
  ☆28Updated 5 years ago
• kundajelab / genomedisco
  Software for comparing contact maps from HiC, CaptureC and other 3D genome data.
  ☆26Updated 6 years ago
• scottgigante / machine-learning-tutorial
  Machine learning tutorial for biologists, designed for Oz Single Cells 2019
  ☆15Updated 5 years ago
• zhangyan32 / HiCPlus
  ☆31Updated 5 years ago
• Dongwon-Lee / lsgkm
  ☆50Updated last year
• BIMSBbioinfo / maui
  Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit
  ☆49Updated last year