pinbo / SNP_Primer_Pipeline2View external linksLinks
Design gene specific KASP and CAPS/dCAPS primers for any species
☆18Sep 19, 2022Updated 3 years ago
Alternatives and similar repositories for SNP_Primer_Pipeline2
Users that are interested in SNP_Primer_Pipeline2 are comparing it to the libraries listed below
Sorting:
- ☆21Sep 22, 2022Updated 3 years ago
- ☆12Apr 10, 2021Updated 4 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 2 years ago
- DeepBSA is a novel bulked segregant analysis (BSA) software for the dissection of complex traits.☆22Aug 6, 2024Updated last year
- MODAS: Multi-Omics Data Association Study toolkit☆21Nov 21, 2024Updated last year
- 生物信息学入门的系列课程,包括Linux, shell, Python 编程,建库测序,基因组学,以及系统进化,常用软件使用等内容。☆22Sep 16, 2021Updated 4 years ago
- scripts☆20Nov 2, 2018Updated 7 years ago
- ☆23Jan 11, 2019Updated 7 years ago
- Gene Prediction using MAKER, CEGMA, SNAP, GENEMARK & AUGUSTUS☆10Jul 20, 2017Updated 8 years ago
- Code and example datasets for Does[0]Compute☆12Dec 2, 2021Updated 4 years ago
- The cattle Genotype-Tissue Expression atlas v1☆28Mar 14, 2023Updated 2 years ago
- Codes for Vmap1.1 and Vmap3☆11Jan 5, 2026Updated last month
- ☆13Apr 30, 2019Updated 6 years ago
- De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk☆10Aug 2, 2023Updated 2 years ago
- Bioinformatics Pipeline☆12Oct 7, 2022Updated 3 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56Jan 21, 2026Updated 3 weeks ago
- ☆11Apr 10, 2016Updated 9 years ago
- The R tool associated with 3VmrMLM, a comprehensive GWAS method for identifying QTNs, QTN-by-environment interactions, and QTN-by-QTN int…☆34Dec 29, 2025Updated last month
- scripts for sequence and feature conversion, annotation, analysis ...☆28Mar 17, 2025Updated 10 months ago
- I often use some of the self-written programs.☆16Nov 13, 2025Updated 3 months ago
- R package for binmap☆12Aug 3, 2023Updated 2 years ago
- bioinformatics R test code☆14Feb 1, 2026Updated 2 weeks ago
- Long Read Based SV Calling Tools Analysis☆14Mar 22, 2024Updated last year
- A novel algorithm with high detection power for BSA-Seq data analysis - the significant structural variant method☆34Aug 1, 2025Updated 6 months ago
- Prioritizing Copy Number Variants (CNV) using Phenotype and Gene Functional Similarity☆17Mar 10, 2022Updated 3 years ago
- GCEN: an easy-to-use toolkit for Gene Co-Expression Network analysis and lncRNAs annotation☆22Mar 26, 2022Updated 3 years ago
- Advanced plotting functions for CNV data generated by CNV-Seq and Control Freec☆13Aug 25, 2020Updated 5 years ago
- ☆18May 27, 2022Updated 3 years ago
- do some exercise☆14Dec 2, 2025Updated 2 months ago
- scripts and intermediate files used to annotate TEs in Jiao et al.☆34Apr 12, 2018Updated 7 years ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Mar 5, 2018Updated 7 years ago
- BamDeal: a comprehensive toolkit for bam manipulation☆15Dec 21, 2022Updated 3 years ago
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Feb 28, 2017Updated 8 years ago
- A tool to visualize the haplotype pattern and various information in excel.☆24Mar 5, 2025Updated 11 months ago
- GBS SNP Calling Reference Optional Pipeline☆33Mar 9, 2022Updated 3 years ago
- Scripts of population genomics analysis☆36May 8, 2018Updated 7 years ago
- A easy-to-use Python API for Primer3 primer design.☆16Nov 10, 2022Updated 3 years ago
- Webapp for design DNA primers for miRNA qPCR process☆15Apr 18, 2017Updated 8 years ago
- Code associated with the manuscript "A complete reference genome improves analysis of human genetic variation".☆17Jan 17, 2023Updated 3 years ago