YuSugihara / QTL-seqLinks
QTL-seq pipeline to identify causative mutations responsible for a phenotype
☆57Updated 7 months ago
Alternatives and similar repositories for QTL-seq
Users that are interested in QTL-seq are comparing it to the libraries listed below
Sorting:
- MutMap pipeline to identify causative mutations responsible for a phenotype☆54Updated 7 months ago
- QTLseqr is an R package for QTL mapping using NGS Bulk Segregant Analysis☆81Updated 5 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56Updated last month
- ☆74Updated 5 years ago
- ☆60Updated last year
- VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Forma…☆97Updated 3 weeks ago
- Genomic related tools☆70Updated 3 years ago
- This script will extract the intron feature gff3 and sequence from gene_exon gff3 and fasta file.☆33Updated 6 years ago
- A pipeline for isoseq☆23Updated 7 years ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆95Updated this week
- Long Reads Annotation pipeline☆72Updated 3 years ago
- BamDeal: a comprehensive toolkit for bam manipulation☆54Updated 2 years ago
- Python package and CLI for whole-genome duplication related analyses. **This package is deprecated in favor of** https://github.com/heche…☆85Updated last year
- ☆82Updated last year
- De novo annotation of young retrotransposons☆48Updated 3 years ago
- Genome annotation pipeline☆61Updated last year
- SNPbinner is a utility for the generation of genotype crossover points and binmaps based on SNP data across recombinant inbred lines.☆37Updated 6 years ago
- A pipeline to generate a phylogenetic tree from huge SNP data☆91Updated last year
- NLR-Annotator upload☆71Updated 2 years ago
- ☆77Updated 5 years ago
- Genome Scripts used in fungal comparative genomics☆66Updated 4 years ago
- Bulked-Segregant Analysis using vcf file with or without parents☆29Updated 9 months ago
- Simple code snippets and data for the One Flowcell - One Assembly study☆35Updated 7 years ago
- My collection of light bioinformatics analysis pipelines for specific tasks☆75Updated last year
- A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)☆63Updated 6 years ago
- tutorial on pggb☆35Updated 8 months ago
- Same species annotation lift over pipeline.☆98Updated 2 years ago
- This is an archive version of old RepBase library (v20170127) for RepeatMasker.☆37Updated 4 years ago
- Useful bioinformatic scripts☆57Updated 9 months ago
- TransposonUltimate - a holistic set of tools for transposon identification☆84Updated 3 years ago