Alternatives and similar repositories for polyGembler

Users that are interested in polyGembler are comparing it to the libraries listed below

• tangerzhang / calc_switchErr
  ☆27Updated 4 months ago
• zy-optimistic / GAEP
  A genome assembly assessment pipeline.
  ☆37Updated last year
• amsession / Kmer-based-Subgenome-Mapping
  ☆21Updated last year
• baozg / phased-assembly-check
  ☆30Updated 7 months ago
• schatzlab / pseudohaploid
  Create a pseudohaploid assembly from a partially resolved diploid assembly
  ☆32Updated 5 years ago
• wushyer / RGAAT_v2
  Add multiple thread function for genome comparison
  ☆15Updated 3 years ago
• vgteam / giraffe-sv-paper
  ☆42Updated last year
• kavonrtep / dante
  Domain based annotation of transposable elements
  ☆20Updated 2 months ago
• A-J-F-Mackintosh / syngraph
  Toolkit for evolutionary analyses of linkage groups
  ☆32Updated last year
• lardo / khaper
  ☆28Updated 3 years ago
• Kirovez / pyTanFinder
  Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results
  ☆12Updated 6 years ago
• cchauve / ANGeS
  Reconstruction of ancestral genome maps
  ☆16Updated 7 years ago
• moold / paf2dotplot
  Draw a dot plot from a paf alignment
  ☆33Updated 4 months ago
• rlorigro / GFAse
  Tool for globally phasing diploid assembly graphs with orthogonal data
  ☆40Updated 8 months ago
• rivasiker / autocoalhmm
  Automated pipeline for running CoalHMM
  ☆13Updated last year
• schmeing / gapless
  Gapless provides combined scaffolding, gap-closing and assembly correction with long reads
  ☆35Updated 2 years ago
• Chenglin20170390 / Haplotype-diversity
  This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…
  ☆30Updated 6 months ago
• Argonum-Clever2 / mike
  ☆31Updated 4 months ago
• zhangrengang / Centromics
  Centromics: visualing centromeres with multiple omics data
  ☆24Updated 5 months ago
• jmsong2 / GenomeSyn
  We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …
  ☆29Updated 3 years ago
• bcgsc / ntSynt-viz
  Multi-genome synteny block visualization tool
  ☆42Updated 6 months ago
• i10labtitech / GINGER
  ☆28Updated last year
• Jianwei-Zhang / DEGAP
  Dynamic Elongation of a Genome Assembly Path
  ☆21Updated last year
• JM-SONG / GenomeSyn
  ☆25Updated 3 years ago
• mrvollger / NucFreq
  ☆37Updated last year
• almeidasilvaf / doubletrouble
  An R package to identify and classify duplicated genes from whole-genome protein sequence data
  ☆27Updated this week
• kensung-lab / hypo-assembler
  ☆41Updated 2 months ago
• zhangrengang / SOI
  Robust identification of orthologous Synteny with the Orthology Index
  ☆25Updated 3 weeks ago
• xjtu-omics / HiCAT
  HiCAT new project
  ☆28Updated 2 months ago
• SwallowGenomics / BarnSwallow
  ☆12Updated 2 years ago