carlaml / LDpred-functLinks
Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337
☆17Updated last year
Alternatives and similar repositories for LDpred-funct
Users that are interested in LDpred-funct are comparing it to the libraries listed below
Sorting:
- Software for estimating correlation of trait effect sizes across populations☆49Updated 3 months ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆33Updated 3 months ago
- ☆22Updated 2 years ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆30Updated last year
- FOCUS: Fine-mapping Of CaUsal gene Sets☆46Updated 2 years ago
- Genotype-based Prediction (GenoPred)☆73Updated this week
- Colocalization analysis of genetic association signals☆54Updated 3 months ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- ☆19Updated last month
- ☆35Updated 2 years ago
- Pariwise analysis of GWAS☆44Updated 6 years ago
- Manhattan++☆28Updated last year
- ☆36Updated 4 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆41Updated 7 years ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆53Updated 4 months ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆52Updated 6 months ago
- Documentation on new GWAS Summary Statistics Standard☆23Updated last year
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- Main ricopili repo for public releases☆49Updated 5 months ago
- An R package for performing STAAR procedure in whole-genome sequencing studies☆95Updated 7 months ago
- ☆16Updated 4 years ago
- Make LocusZoom-like plots with your own LD matrix.☆44Updated 3 years ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆68Updated 11 months ago
- Source code of FUMA GWAS web application☆58Updated last year
- ☆62Updated 3 years ago
- Fast, integrative fine mapping with functional data☆60Updated 6 years ago
- R script to make Manhattan-style plot for TWAS☆40Updated 4 years ago
- Leveraging functional information to improve GWAS summary statistic imputation☆19Updated 4 years ago
- Regional association plots☆25Updated last year
- Statistical fine-mapping pipeline in FinnGen☆30Updated 3 months ago