DEPICT code, instructions and an example
☆57Dec 10, 2025Updated 10 months ago
Alternatives and similar repositories for DEPICT
Users that are interested in DEPICT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Mar 24, 2023Updated 3 years ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆15Jul 2, 2025Updated last year
- ☆11Mar 16, 2022Updated 4 years ago
- Multi-Omic Strategies for TWAS☆13Mar 27, 2023Updated 3 years ago
- ☆34Oct 18, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Jun 27, 2023Updated 3 years ago
- Gaussian imputation of GWAS summary statistics☆15Apr 16, 2015Updated 11 years ago
- Tissue-Gene Fine-Mapping☆30Mar 20, 2025Updated last year
- An R package for phenotype generation and association testing for phenome wide associations studies (PheWAS)☆14Jul 11, 2024Updated 2 years ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Oct 6, 2023Updated 3 years ago
- ☆42Jan 20, 2021Updated 5 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Aug 2, 2022Updated 4 years ago
- SMR-IVW extension of the SMR software☆10Mar 17, 2023Updated 3 years ago
- ☆23Sep 1, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆22Apr 28, 2022Updated 4 years ago
- Software to infer latent pleiotropic components from GWAS summary data☆18Jan 30, 2025Updated last year
- ☆13Jan 30, 2025Updated last year
- Pleiotropy-informed conditional and conjunctional false discovery rate☆40Jun 3, 2025Updated last year
- software package for integrative genetic association analysis☆38Jul 8, 2023Updated 3 years ago
- Software for estimating correlation of trait effect sizes across populations☆62May 30, 2025Updated last year
- methods for functional summary-based imputation☆113Mar 17, 2026Updated 7 months ago
- Estimate genetic correlation using predicted expression☆28Mar 8, 2018Updated 8 years ago
- ☆68Dec 30, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- High-definition likelihood inference of genetic correlations (HDL)☆144Sep 13, 2026Updated last month
- Single cell Type Enrichment Analysis for Phenotypes (STEAP)☆14Jun 16, 2021Updated 5 years ago
- Python script for multivariate GWAS meta-analysis☆25Dec 6, 2024Updated last year
- ☆21Nov 15, 2024Updated last year
- A software package for performing and visualising radial multivariable Mendelian randomization analyses☆13Oct 7, 2026Updated 3 weeks ago
- hJAM is a hierarchical model which unifies the framework of Mendelian Randomization and Transcriptome-wide association studies.☆12Jan 19, 2024Updated 2 years ago
- Proteome-Wide Association Study☆52Apr 4, 2021Updated 5 years ago
- EXpression PREdiction with Summary Statistics Only☆15Dec 10, 2025Updated 10 months ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆48Aug 30, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆98Updated this week
- ☆36Dec 19, 2023Updated 2 years ago
- ☆23Aug 28, 2026Updated 2 months ago
- A tool to build a website to browse hundreds or thousands of GWAS.☆199Apr 22, 2026Updated 6 months ago
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆56Dec 10, 2025Updated 10 months ago
- ☆10Jan 20, 2023Updated 3 years ago
- R package 📦 for handy functions when working with GWAS (summary) data☆17Jul 29, 2019Updated 7 years ago