perslab / DEPICTLinks
DEPICT code, instructions and an example
☆53Updated last month
Alternatives and similar repositories for DEPICT
Users that are interested in DEPICT are comparing it to the libraries listed below
Sorting:
- In-house computational biology workflows at Columbia Neurology☆36Updated 4 months ago
- ☆51Updated last month
- software package for integrative genetic association analysis☆35Updated 2 years ago
- Sample code for ldsc analyses in UKBB☆32Updated 2 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆48Updated 2 years ago
- ☆35Updated 2 years ago
- LDlinkR☆63Updated last year
- Easily download publicly available GWAS summary statistics.☆78Updated 2 years ago
- Functional genomics and genome-wide association studies☆69Updated 7 years ago
- Phenome Exome Association and Correlation Of Key phenotypes☆31Updated 4 years ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 7 years ago
- Tumour stratification by maximum-likelihood repeated evolution from multi-region sequencing data☆66Updated 3 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆47Updated 2 years ago
- ☆18Updated 8 years ago
- Identify and correct invalid gene symbols☆61Updated last year
- Code for implementing Mendelian randomization investigations☆20Updated 10 years ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆44Updated last year
- ☆88Updated 5 months ago
- Colocalization analysis of genetic association signals☆53Updated 7 months ago
- Main ricopili repo for public releases☆51Updated 9 months ago
- QTL Discovery using Annotations☆28Updated 3 years ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆54Updated 3 months ago
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆24Updated 6 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆20Updated 2 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- Genoppi: an open-source software for robust and standardized integration of proteomic and genetic data☆26Updated last year
- ☆38Updated 4 years ago
- Fast, integrative fine mapping with functional data☆61Updated 6 years ago
- Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.☆60Updated 2 months ago
- GWAS gold standards repository☆39Updated 2 years ago