tobyjohnson / gtxLinks
Genetics ToolboX R package
☆31Updated 5 years ago
Alternatives and similar repositories for gtx
Users that are interested in gtx are comparing it to the libraries listed below
Sorting:
- ☆18Updated 7 years ago
- Code for implementing Mendelian randomization investigations☆17Updated 9 years ago
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆13Updated 2 years ago
- Regional association plots☆25Updated last year
- A collection of various utilities for GWAS summary statistics☆27Updated last year
- GWAS for survival analysis in large cohorts☆21Updated 10 months ago
- Upgrade to coloc☆13Updated 6 years ago
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆23Updated 3 years ago
- R package to perform Bayesian Genome-Wide Association Studies☆40Updated last year
- ☆32Updated last year
- GENI plots to visualise results from genome-wide association studies☆27Updated 7 months ago
- Primo☆16Updated 3 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆32Updated 4 years ago
- LDlinkR☆59Updated last year
- Regional association plots☆26Updated last year
- Code supporting analyses in paper on fine-mapping AD loci☆15Updated 3 years ago
- Sample code for ldsc analyses in UKBB☆30Updated 2 years ago
- Manhattan++☆28Updated last year
- Colocalization analysis of genetic association signals☆53Updated 3 weeks ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆45Updated last year
- QTL Discovery using Annotations☆25Updated 2 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Updated 2 years ago
- ☆15Updated 4 years ago
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆23Updated 5 years ago
- causal TWAS (cTWAS)☆43Updated last week
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆30Updated last year
- An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.☆38Updated 5 months ago
- Scripts used for generating Neale Lab UKB results☆19Updated 2 years ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆63Updated 7 months ago