barupal / ChemRICHView external linksLinks
Chemical Similarity Enrichment analysis of metabolomics datasets
☆30Jul 19, 2024Updated last year
Alternatives and similar repositories for ChemRICH
Users that are interested in ChemRICH are comparing it to the libraries listed below
Sorting:
- ☆28Nov 30, 2023Updated 2 years ago
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆13May 29, 2024Updated last year
- Repo hosting the MetFrag website☆10Jan 24, 2025Updated last year
- Mass spectral library manager☆13Apr 9, 2020Updated 5 years ago
- Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…☆15Jun 1, 2023Updated 2 years ago
- R interface to Chemical Translation Service (CTS)☆17Jul 27, 2024Updated last year
- Retip - Retention Time prediction for metabolomics☆32Jun 6, 2024Updated last year
- Creating and using (chemical) compound databases☆19Jan 28, 2026Updated 2 weeks ago
- geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics☆11Sep 17, 2021Updated 4 years ago
- Flash entropy search☆16Sep 24, 2023Updated 2 years ago
- Network mapping tool for metabolomics + data.☆53Feb 5, 2016Updated 10 years ago
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆13Jan 30, 2026Updated 2 weeks ago
- R Interface to the Metabolights REST API☆11Aug 19, 2025Updated 5 months ago
- Defined MRM transitions from untargeted metabolomics data☆11Nov 13, 2023Updated 2 years ago
- Single sample pathway analysis tools for omics data☆13Nov 9, 2024Updated last year
- Efficiently predicting high resolution mass spectra with graph neural networks☆32Aug 3, 2023Updated 2 years ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆19Jan 24, 2024Updated 2 years ago
- Calculation and visualization of molecular networks based on t-SNE algorithm☆36Jan 29, 2025Updated last year
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Mar 7, 2020Updated 5 years ago
- Shiny app for retention time prediction☆10Dec 1, 2025Updated 2 months ago
- Annotation of in source LC/MS data☆12Oct 19, 2024Updated last year
- The mwtab package is a Python library that facilitates reading and writing files in mwTab format used by the Metabolomics Workbench for a…☆12Jan 20, 2026Updated 3 weeks ago
- A package to cluster and visualise MS/MS spectral data☆11Feb 26, 2021Updated 4 years ago
- ☆33Dec 12, 2024Updated last year
- The tools that constitute a nontargeted LCMS metabolomics data processing pipeline, created and used by the Broad Institute Metabolomics …☆13Nov 21, 2025Updated 2 months ago
- ☆11Jun 12, 2024Updated last year
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆16Dec 5, 2025Updated 2 months ago
- R Interface to the ClassyFire REST API☆12Feb 21, 2025Updated 11 months ago
- ☆55Apr 15, 2021Updated 4 years ago
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆24Nov 11, 2024Updated last year
- data processing for MS-based metabolomics☆15Nov 10, 2024Updated last year
- Trigger the Google Genomics Pipeline API with CWL☆11Feb 7, 2017Updated 9 years ago
- A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16May 10, 2024Updated last year
- In silico chemical library engine for high-accuracy chemical property prediction☆63May 2, 2025Updated 9 months ago
- Risa allows to access metadata/data in ISA-tab format and builds Bioconductor data structures. Apart from parsing ISA-tab files, the pack…☆20Oct 17, 2018Updated 7 years ago
- ☆15Jun 3, 2021Updated 4 years ago
- A database of In-Silico predicted MS/MS spectrum of Natural Products☆15Sep 24, 2022Updated 3 years ago
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆28May 25, 2023Updated 2 years ago
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆51Aug 28, 2023Updated 2 years ago