dadrasarmin / enrichment_analysis_for_non_model_organismLinks
In this repo, I explain how can we use clusterProfiler and Tidyverse to perform (GO or KEGG) enrichment analysis in R.
☆18Updated last year
Alternatives and similar repositories for enrichment_analysis_for_non_model_organism
Users that are interested in enrichment_analysis_for_non_model_organism are comparing it to the libraries listed below
Sorting:
- scripts for sequence and feature conversion, annotation, analysis ...☆27Updated 3 months ago
- GENE-SWitCH project RNA-Seq analysis pipeline☆26Updated 4 months ago
- Scripts to convert between file formats for various analyses☆16Updated last month
- LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files☆30Updated last year
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆26Updated 3 months ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 2 months ago
- Snakemake pipeline to analyze transposable element 'omics data.☆24Updated this week
- read and analyse RepeatMasker output☆24Updated 2 years ago
- An R package to infer and analyze synteny networks from protein sequences☆30Updated 6 months ago
- ☆14Updated 9 months ago
- convert a blast output to a bed file☆12Updated 10 years ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Updated last year
- Yet another Hi-C scaffolding tool☆20Updated 8 months ago
- R package to draw syntenic plots in 3 different styles☆41Updated last year
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆19Updated 4 years ago
- ☆26Updated 4 months ago
- ☆27Updated 6 months ago
- Sorting and subsampling phylogenomic datasets☆24Updated 2 months ago
- A tool for performing collinearity-incorporating homology inference☆32Updated last year
- Calculate GC% and GC deviation for circular genomes☆17Updated 4 years ago
- ☆25Updated 2 years ago
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆31Updated 4 years ago
- R package for comparison of synteny conservation at the genome-wide scale.☆14Updated last year
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆21Updated 4 years ago
- Transposable Elements MOvement detection using LOng reads☆22Updated 2 weeks ago
- Multi-genome synteny block visualization tool☆42Updated 5 months ago
- scripts for the project of seven thaliana genomes assembly☆39Updated 4 years ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆16Updated last year
- ☆32Updated last year
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 2 years ago