Alternatives and similar repositories for enrichment_analysis_for_non_model_organism

Users that are interested in enrichment_analysis_for_non_model_organism are comparing it to the libraries listed below

• hewm2008 / LDBlockShow
  LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files
  ☆36Updated 6 months ago
• drostlab / LTRpred
  De novo annotation of young retrotransposons
  ☆48Updated 3 years ago
• robinvanderlee / positive-selection
  Scripts and procedures for detecting positively selected genes and codons in primates
  ☆22Updated 5 years ago
• junjunlab / GetTransTool
  Extract longest transcript or longest CDS transcript from GTF annotation file or gencode transcripts fasta file.
  ☆21Updated 3 years ago
• ISUgenomics / common_scripts
  my bin directory
  ☆45Updated 4 months ago
• Sunhh / NGS_data_processing
  Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.
  ☆56Updated last week
• dwinter / repeatR
  read and analyse RepeatMasker output
  ☆27Updated 2 years ago
• FAANG / analysis-TAGADA
  GENE-SWitCH project RNA-Seq analysis pipeline
  ☆29Updated 11 months ago
• DrosophilaGenomeEvolution / TrEMOLO
  Transposable Elements MOvement detection using LOng reads
  ☆25Updated 6 months ago
• thackl / seq-scripts
  scripts for sequence and feature conversion, annotation, analysis ...
  ☆28Updated 10 months ago
• mongiardino / genesortR
  Sorting and subsampling phylogenomic datasets
  ☆28Updated 9 months ago
• schneebergerlab / AMPRIL-genomes
  scripts for the project of seven thaliana genomes assembly
  ☆42Updated 4 years ago
• 4ureliek / TEanalysis
  Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.
  ☆29Updated 6 years ago
• akcorut / kGWASflow
  kGWASflow is a Snakemake workflow for performing k-mers-based GWAS.
  ☆45Updated last year
• pangenome / pggb-workshop
  tutorial on pggb
  ☆36Updated last year
• popgenome / lettuce2020
  Codes for the lettuce resequencing project in 2020
  ☆31Updated 4 years ago
• josephhughes / Sequence-manipulation
  A range of different perl scripts for manipulating sequences, conducting alignments, consensus sequences, changing formats
  ☆29Updated last month
• Gabaldonlab / perSVade
  perSVade: personalized Structural Variation detection
  ☆40Updated last week
• molevol-ub / bitacora
  BITACORA: A Bioinformatics tool for gene family annotation
  ☆51Updated last month
• hahnlab / CAGEE
  Computational Analysis of Gene Expression Evolution
  ☆45Updated 5 months ago
• sansubs / vcf2pop
  ☆29Updated last year
• kentnf / iTAK
  iTAK
  ☆48Updated last year
• Hua-CM / HuaSmallTools
  Some bioinformic domestic scripts.
  ☆35Updated 3 years ago
• jeffersonfparil / compare_genomes
  A comparative genomics workflow using Nextflow, conda, Julia and R
  ☆49Updated last year
• ISUgenomics / common_analyses
  Repository of common bioinformatics scripts
  ☆39Updated 4 years ago
• Farre-lab / syntenyPlotteR
  R package to draw syntenic plots in 3 different styles
  ☆44Updated 5 months ago
• WenchaoLin / GCcalc
  Calculate circos format data of GC content and GC skew from genome data.
  ☆12Updated 4 months ago
• lauguma / GWideCodeML
  A Python package for testing evolutionary hypotheses in genome-wide approaches.
  ☆33Updated 4 years ago
• xuzhougeng / myscripts
  ☆63Updated last year
• WenchaoLin / assemblyStatistics
  A simple program for evaluate the assembly of a give genome.
  ☆18Updated 2 years ago