A single cell RNA-seq reference map of human hematopoietic development in the bone marrow, with balanced representation of hematopoietic stem and progenitor cells and differentiated populations
☆90Mar 6, 2026Updated last month
Alternatives and similar repositories for BoneMarrowMap
Users that are interested in BoneMarrowMap are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Analysis notebooks and data for AML hierarchies paper☆19Jun 28, 2023Updated 2 years ago
- R package to analyze single cell DNA sequencing data.☆10Jan 28, 2026Updated 2 months ago
- ☆12Jan 29, 2025Updated last year
- A framework for performing single-cell and bulk read full-length analysis of mutations and splicing.☆54Apr 8, 2026Updated last week
- Workflow to reproduce results and figures for the second BeatAML manuscript☆16Jun 28, 2022Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Oct 17, 2024Updated last year
- ☆10May 31, 2022Updated 3 years ago
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆52Mar 13, 2026Updated last month
- AUCell: score single cells with gene regulatory networks☆190Mar 9, 2024Updated 2 years ago
- scNOVA : Single-Cell Nucleosome Occupancy and genetic Variation Analysis☆11Jul 29, 2023Updated 2 years ago
- processes GoT amplicon data and generates a table of metrics☆32Jun 24, 2022Updated 3 years ago
- R Package for phasing of single cell Strand-seq data☆10Jan 14, 2025Updated last year
- A collection of scripts used to recreate files and graphs used in the MMRF CoMMpass analysis.☆24Nov 23, 2025Updated 4 months ago
- Computational identification of targets for CAR-T cell therapy in AML☆21Dec 25, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Identify major cellular signals in bulk transcriptomes☆11Jun 1, 2022Updated 3 years ago
- An R package performing object conversion from ArchRProject (ArchR) to Signac SeuratObject (Signac)☆39Aug 22, 2024Updated last year
- CosMx Spatial Molecular Imager-derived cell profiles to aid in cell typing of SMI data.☆36Jan 24, 2025Updated last year
- ☆23Jan 20, 2021Updated 5 years ago
- ☆12Dec 4, 2023Updated 2 years ago
- ☆20Nov 21, 2025Updated 4 months ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Jan 15, 2023Updated 3 years ago
- Inferring CNV from Single-Cell RNA-Seq☆662Nov 14, 2025Updated 5 months ago
- Map query sequences to the assemblies of all pre-June 2023 bacteria (https://ftp.ebi.ac.uk/pub/databases/AllTheBacteria/Releases/0.2/) on…☆12May 22, 2024Updated last year
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- An R package for performing cell typing in SMI and other single cell data☆49May 19, 2025Updated 10 months ago
- R package to infer biological activities from omics data using a collection of methods.☆289Dec 16, 2025Updated 3 months ago
- HiCtrans is a pipeline to call translocations from Hi-C data☆17Sep 27, 2021Updated 4 years ago
- ☆14Mar 7, 2024Updated 2 years ago
- TRUST4 manuscript evaluation☆17Jul 8, 2022Updated 3 years ago
- Processing scripts for single cell DNA sequencing on the Tapestri platform☆24Apr 11, 2023Updated 3 years ago
- A GA4GH Draft Beacon implementation☆11Oct 23, 2015Updated 10 years ago
- A repository for hosting Nextflow DSL2 module files containing tool-specific process definitions and their associated documentation for M…☆11Apr 1, 2026Updated last week
- ☆31Nov 2, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- An open, collaborative project to analyze data from the Single-cell Pediatric Cancer Atlas (ScPCA) Portal☆15Feb 5, 2026Updated 2 months ago
- MethyLYZR: a Naïve Bayesian framework for rapid brain tumor classification from sparse epigenomic data☆18Mar 3, 2025Updated last year
- Repository for the clone2vec python package☆15Apr 5, 2026Updated last week
- Easy Copy Number !☆21Aug 27, 2025Updated 7 months ago
- The Isoforms from Single-Cell; Long-read Expression Suite☆38Jan 14, 2025Updated last year
- Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets☆124Apr 16, 2025Updated 11 months ago
- Efficient genotyping bi-allelic SNPs on single cells☆158Oct 30, 2025Updated 5 months ago