andygxzeng / AMLHierarchiesLinks
Analysis notebooks and data for AML hierarchies paper
☆16Updated 2 years ago
Alternatives and similar repositories for AMLHierarchies
Users that are interested in AMLHierarchies are comparing it to the libraries listed below
Sorting:
- A R framework for pipeline benchmarking, with application to single-cell RNAseq☆41Updated 3 years ago
- ☆29Updated 7 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- An R package to download and merge labeled single-cell RNA-seq data from the PanglaoDB database into a Seurat object.☆27Updated 2 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- ☆47Updated 6 months ago
- Code to reproduce TNBC analysis and figures☆24Updated 3 years ago
- ☆56Updated last year
- ☆25Updated 4 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- ☆47Updated last year
- ☆55Updated 4 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Updated 3 months ago
- Enrichment Networks for Pathway Enrichment Analysis☆55Updated 2 years ago
- ☆30Updated 5 years ago
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆29Updated 2 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆36Updated 3 months ago
- ☆41Updated 4 years ago
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆33Updated last month
- A unified interface to spatial transcriptomics deconvolution tools☆41Updated last week
- Immune evasion before tumor invasion in early squamous lung cell carcinogenesis☆16Updated 3 years ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Updated 3 years ago
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".☆18Updated 5 years ago
- R package for specialised analysis of single cell data☆38Updated 2 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- R package containing the Cerebro application.☆40Updated 3 years ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- R package for Bioconductor submission☆35Updated 2 years ago