cBioPortal / 2020-cbioportal-r-workshopLinks
Workshop materials for cBioPortal Webinar 5: API & R Client
☆19Updated 5 years ago
Alternatives and similar repositories for 2020-cbioportal-r-workshop
Users that are interested in 2020-cbioportal-r-workshop are comparing it to the libraries listed below
Sorting:
- Template for building a bioconductor workshop package using github actions☆20Updated 3 weeks ago
- The blog of tidyomics☆14Updated this week
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated 2 weeks ago
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆20Updated last week
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 4 years ago
- A Grammar of Data Manipulation for Omics Data☆21Updated 4 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated 2 months ago
- Clone of the Bioconductor repository for the basilisk package.☆28Updated last month
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- An R package to plot interactive three-way differential expression analysis☆38Updated last year
- Toolbox package for organizing and working with TCGA data☆28Updated last week
- This is the ensembldb development repository.☆35Updated 10 months ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆78Updated 2 months ago
- R interface to morpheus.js heatmap widget☆38Updated 4 years ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆64Updated 3 weeks ago
- Bioconductor package for management of multi-assay data☆72Updated 2 months ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆10Updated last year
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Updated 5 years ago
- Gene-level general linear mixed model☆22Updated 5 months ago
- A container (S4 class) for matrix-like assays☆36Updated 3 weeks ago
- Take command of your set enrichment analyses.☆21Updated this week
- Cancer Dependency Map package☆30Updated 11 months ago
- An interactive web portal for exploring immuno-oncology data. This repo now superseded by iatlas-app☆49Updated 4 years ago
- Single Cell multimodal data scripts for downloading datasets☆17Updated last month
- DEAPP shiny App☆30Updated 3 years ago
- Visualize Cytometry data with ggplot2☆59Updated last week
- Demonstration of the use of an R package to organize a data analysis project☆21Updated 5 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated last month