cBioPortal / 2020-cbioportal-r-workshopLinks
Workshop materials for cBioPortal Webinar 5: API & R Client
☆19Updated 5 years ago
Alternatives and similar repositories for 2020-cbioportal-r-workshop
Users that are interested in 2020-cbioportal-r-workshop are comparing it to the libraries listed below
Sorting:
- Template for building a bioconductor workshop package using github actions☆21Updated 6 months ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated 2 months ago
- Clone of the Bioconductor repository for the basilisk package.☆29Updated 2 months ago
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆21Updated 4 months ago
- The blog of tidyomics☆14Updated 6 months ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 5 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆31Updated last month
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Updated 5 years ago
- A Grammar of Data Manipulation for Omics Data☆21Updated 5 years ago
- Bioconductor facilities for parallel evaluation☆69Updated 2 months ago
- An R package to plot interactive three-way differential expression analysis☆38Updated this week
- Modular & interactive analysis components for bioinformatics☆18Updated last month
- R interface to morpheus.js heatmap widget☆40Updated 5 years ago
- Automate package and project setup for Bioconductor packages☆54Updated 9 months ago
- Explore design matrices interactively with R/Shiny☆38Updated 2 months ago
- An introduction to matrix factorization and PCA and SVD.☆41Updated 2 years ago
- My notes/usage examples for various Bioconductor packages☆15Updated 9 years ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- Toolbox package for organizing and working with TCGA data☆28Updated last month
- An interactive web portal for exploring immuno-oncology data. This repo now superseded by iatlas-app☆49Updated 4 years ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆10Updated last year
- A container (S4 class) for matrix-like assays☆36Updated 2 months ago
- Demonstration of the use of an R package to organize a data analysis project☆22Updated 5 years ago
- R-Based API for accessing the MSKCC Cancer Genomics Data Server (CGDS)☆25Updated 5 years ago
- This is the ensembldb development repository.☆36Updated 4 months ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- DEAPP shiny App☆30Updated 3 years ago
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆79Updated last month
- Bioconductor package for management of multi-assay data☆74Updated 2 months ago