wanqingshao / TE_expression_in_scRNAseqView external linksLinks
☆20Nov 15, 2020Updated 5 years ago
Alternatives and similar repositories for TE_expression_in_scRNAseq
Users that are interested in TE_expression_in_scRNAseq are comparing it to the libraries listed below
Sorting:
- A pipeline for Smooth-seq data analysis.☆10Sep 23, 2021Updated 4 years ago
- ☆17Apr 9, 2021Updated 4 years ago
- ☆30Jul 15, 2021Updated 4 years ago
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11May 25, 2023Updated 2 years ago
- https://molecular-neurogenetics.github.io/truster/☆11Jul 14, 2025Updated 7 months ago
- Blastocyst-like structures generated from human pluripotent stem cells☆13Sep 25, 2022Updated 3 years ago
- A collection of perl scripts for NGS analysis☆17Oct 2, 2024Updated last year
- TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data☆27May 5, 2023Updated 2 years ago
- ☆19Mar 8, 2023Updated 2 years ago
- ☆19Sep 29, 2021Updated 4 years ago
- ☆114Apr 24, 2024Updated last year
- Multi-Enrichment Analysis of Gene Set Enrichment Analysis Results☆26Feb 4, 2026Updated last week
- Software for detecting transposable element insertions from next-generation sequencing data☆14Mar 12, 2021Updated 4 years ago
- scripts for analyzing data of macrophage development in human☆10Dec 8, 2019Updated 6 years ago
- ☆27Apr 18, 2018Updated 7 years ago
- ☆10Jan 29, 2020Updated 6 years ago
- CircRNA testing and ploting R package☆10Nov 23, 2020Updated 5 years ago
- ☆10Mar 11, 2025Updated 11 months ago
- Tool comparison for detecting differentially expressed individual transposable elements☆11Jan 7, 2022Updated 4 years ago
- single nuclei RNA-seq analysis toolbox☆10Oct 26, 2016Updated 9 years ago
- Survival Analysis for Protein-Level TCGA Analysis☆11Nov 30, 2018Updated 7 years ago
- Deposited codes for snMultiome in human cortex manuscript☆14Aug 12, 2024Updated last year
- Transposable element expression at unique loci in single cells with CELLO-seq☆11Jun 17, 2024Updated last year
- Snakemake pipeline for plate scATAC-seq processing☆26Dec 7, 2023Updated 2 years ago
- Code related to the Celligner manuscript☆46Oct 30, 2020Updated 5 years ago
- ☆47Apr 18, 2020Updated 5 years ago
- Workflow for performing cistrome-wide associations studies☆11Jul 25, 2022Updated 3 years ago
- ☆14Apr 2, 2025Updated 10 months ago
- Bullseye analysis pipeline for DART-seq analysis☆15Jul 8, 2025Updated 7 months ago
- BPNet manuscript code.☆12Dec 1, 2020Updated 5 years ago
- Code to reproduce analyses and figures for Kamath et al., 2022☆12May 5, 2022Updated 3 years ago
- Client to access ExperimentHub resources☆11Oct 30, 2025Updated 3 months ago
- ☆13Mar 29, 2024Updated last year
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Jan 14, 2024Updated 2 years ago
- The Single-Cell Pathology Landscape of Breast Cancer☆27Jan 14, 2020Updated 6 years ago
- The C. elegans transcriptome at single cell resolution☆11Mar 28, 2018Updated 7 years ago
- CircSplice☆12Feb 27, 2019Updated 6 years ago
- Do microbiome analysis with dada2 and phyloseq object☆14Oct 9, 2024Updated last year
- Paired-seq☆15Jul 17, 2024Updated last year