biologyguy / BuddySuiteLinks
Bioinformatics toolkits for manipulating sequence, alignment, and phylogenetic tree files
☆129Updated 4 years ago
Alternatives and similar repositories for BuddySuite
Users that are interested in BuddySuite are comparing it to the libraries listed below
Sorting:
- An imagemagick-like frontend to Biopython SeqIO☆116Updated last year
- A robust, extensible metagenomics pipeline☆174Updated this week
- PAired-eND Assembler for DNA sequences☆137Updated 4 years ago
- In this repo you will find demos and tutorials prepared by members of the CBIB. Feel free to use them for non-commercial activities given…☆84Updated 7 years ago
- Alignment viewer for linux terminal☆124Updated 2 months ago
- an interactive viewer for populations of bacterial genomes linked by a phylogeny☆129Updated last year
- Biopieces is a bioinformatic framework of tools easily used and easily created.☆144Updated 7 years ago
- Download files from NCBI Entrez by accession☆131Updated last year
- MEGAN Community Edition☆72Updated last year
- just annotate it, dammit!☆93Updated 2 years ago
- breseq is a computational pipeline for finding mutations relative to a reference sequence using high-throughput DNA resequencing data. It…☆173Updated 3 weeks ago
- FunGAP: fungal Genome Annotation Pipeline☆111Updated 6 months ago
- Curated Metagenomic Data of the Human Microbiome☆143Updated last month
- ☆133Updated last year
- Software for aligning viewing and editing dna/aminoacid sequences, intuitive, fast and lightweight. Download and website:☆145Updated 9 months ago
- Demonstrating best practices for bioinformatics command line tools☆117Updated 5 years ago
- ☆74Updated 4 years ago
- motus - a tool for marker gene-based OTU (mOTU) profiling☆163Updated 2 weeks ago
- Bioinformatics Tools☆89Updated 2 weeks ago
- V-pipe is a pipeline designed for analysing NGS data of short viral genomes☆144Updated 3 weeks ago
- Sequana: a set of Snakemake NGS pipelines☆151Updated 3 weeks ago
- A library and collection of scripts to work with Illumina paired-end data (for CASAVA 1.7+ pipeline).☆93Updated 2 weeks ago
- Processing pipeline for pan-genome visulization and exploration☆142Updated 2 years ago
- Convert various sequence formats to FASTA☆140Updated this week
- Simple FASTQ quality assessment using Python☆108Updated 4 years ago
- HyPhy: Hypothesis testing using Phylogenies☆245Updated this week
- A console-based alignment viewer☆117Updated 5 months ago
- Practical, reusable scripts for bioinformatics☆102Updated 6 years ago
- Antibiotic resistance prediction in minutes☆112Updated last year
- Assembly and intrahost/low-frequency variant calling for viral samples☆148Updated 2 weeks ago