Alternatives and similar repositories for compbio:

Users that are interested in compbio are comparing it to the libraries listed below

• JasonJWilliamsNY / 2018_nih_datascience_rfi
  This is a short response to the 2018 RFI on NIH Strategic Plan for Data Science
  ☆16Updated 7 years ago
• davek44 / utility
  Computational biology utility scripts
  ☆19Updated last week
• scikit-bio / scikit-bio-cookbook
  Recipes for bioinformatics analyses with scikit-bio
  ☆41Updated 8 years ago
• brentp / fishers_exact_test
  Fishers Exact Test for Python (Cython)
  ☆65Updated last month
• sjspielman / pyvolve
  Python library to simulate evolutionary sequence data
  ☆78Updated 3 years ago
• WarrenWeckesser / heatmapcluster
  A python library for generating a clustered heatmap with dendrograms.
  ☆32Updated 3 years ago
• dmnfarrell / pybioviz
  bioinformatics visualization tools with pyviz/bokeh
  ☆20Updated last year
• harmslab / epistasis
  A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.
  ☆34Updated last year
• dhbradshaw / ml-for-genomics
  Lists open source machine learning projects solving genomic or molecular biology problems.
  ☆29Updated 7 years ago
• mgalardini / python_plotting_snippets
  Tips and tricks for plotting in python
  ☆28Updated 6 years ago
• flaxmans / CompBio_on_git
  My computational biology course as it evolves in real time
  ☆14Updated 3 years ago
• gmcvicker / genome
  Python library and scripts for retrieval and storage of genomics data in HDF5 format
  ☆26Updated 6 years ago
• blekhmanlab / hominid
  Hominid: host-microbiome interaction identification
  ☆16Updated 10 months ago
• vals / Reading-PCA
  ☆16Updated 7 years ago
• AAnzel / MOVIS
  MOVIS: A Multi-Omics Software Solution for Multi-modal Time-Series Clustering, Embedding, and Visualizing Tasks, by Aleksandar Anžel, Dom…
  ☆10Updated 2 years ago
• schlegelp / bioRxiv-LaTeX-template
  LaTeX template to create a compiled PDF (text+figures) e.g. for bioRxiv.org
  ☆21Updated 9 years ago
• ypriverol / github-paper
  Plos in Computational Biology paper related with github for researchers, code, source and document
  ☆59Updated 8 years ago
• genepattern / genepattern-notebook
  Platform for integrating genomic analysis with Jupyter Notebooks.
  ☆44Updated 8 months ago
• swcarpentry / DEPRECATED-boot-camps
  DEPRECATED: please see individual lesson repositories for current material.
  ☆96Updated 8 years ago
• kundajelab / training_camp
  Genetics training camp
  ☆21Updated 4 years ago
• ueser / FIDDLE
  Flexible Integration of Data with Deep LEarning
  ☆50Updated 2 years ago
• gagneurlab / concise
  Concise: Keras extension for regulatory genomics
  ☆35Updated 2 years ago
• lucapinello / Haystack
  Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline
  ☆30Updated 7 years ago
• leipzig / SandwichesWithSnakemake
  This is a beginner's tutorial to Snakemake
  ☆70Updated 9 years ago
• jmschrei / rambutan
  Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.
  ☆21Updated 6 years ago
• unlearnai / genemunge
  Tools for munging genomic data
  ☆21Updated 5 years ago
• hbc / NGS-Data-Analysis-long-course
  ☆11Updated 7 years ago
• gwh120104 / deepmetabolism
  DeepMetabolism is a deep learning algorithm to predict phenotype from genome sequencing
  ☆31Updated 7 years ago
• ismms-himc / codex_dashboard
  Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data
  ☆17Updated last year
• daler / biomartpy
  Simple interface to BioMart (Python -> rpy2 -> R/BioConductor's biomaRt)
  ☆17Updated 10 years ago