sjackman / docker-bioLinks
Docker images of bioinformatics software
☆21Updated 8 years ago
Alternatives and similar repositories for docker-bio
Users that are interested in docker-bio are comparing it to the libraries listed below
Sorting:
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- ☆19Updated 8 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- reference free variant assembly☆33Updated 2 years ago
- An integrated high performance bioinformatics toolkit☆23Updated 6 years ago
- Toolbox for generic NGS analyses - A framework to quickly build pipelines and to perform large-scale NGS analysis☆18Updated 2 years ago
- Pipeline for poreathon☆14Updated 10 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 7 years ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 6 years ago
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- blast, shmlast☆22Updated 4 years ago
- Request for comments on interchangeable bioinformatics containers☆40Updated 6 years ago
- ☆37Updated 4 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated 7 months ago
- Virus metagenomic pipeline for unknown host or in absence of a host genome☆18Updated 5 years ago
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- ☆13Updated 7 years ago
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 3 years ago
- A fast, easy way to present complex bioinformatics pipelines to biologists☆11Updated 6 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago
- This repository has been archived, currently maintained version is at https://github.com/iii-companion/companion☆21Updated 4 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Updated 6 years ago
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/☆18Updated 6 years ago
- Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.☆47Updated 6 years ago
- Nanopore desc☆18Updated 8 years ago
- Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …☆24Updated 7 years ago
- A configurable de novo assembly pipeline☆28Updated 9 years ago
- Trigger the Google Genomics Pipeline API with CWL☆11Updated 8 years ago
- Course material for the de novo assembly part of the INF-BIO9120 course at Univ. of Oslo Fall 2013☆37Updated 11 years ago