Alternatives and similar repositories for LncPipeReporter

Users that are interested in LncPipeReporter are comparing it to the libraries listed below

• mani2012 / BatchQC
  Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.
  ☆35Updated 2 years ago
• sk-sahu / sig-bio-shiny
  A standalone interactive application for detecting biological significance on a set of genes
  ☆40Updated 4 years ago
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆37Updated last week
• JhuangLab / iseq
  An integrated analysis toolkit and pipeline for Next-Generation Sequencing (NGS) panel sequencing data
  ☆14Updated 7 years ago
• griffithlab / genviz.org
  Genomic data interpretation and visualization Workshop
  ☆21Updated 2 months ago
• G3viz / g3viz
  Lollipop-diagram to interactively visualize genetic mutations
  ☆33Updated last year
• mrcuizhe / interacCircos
  An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot
  ☆28Updated 3 years ago
• Kuanhao-Chao / RNASeqR
  📊 An R package of RNA-seq workflow
  ☆15Updated 3 years ago
• itsvenu / ALPS
  AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project
  ☆16Updated 2 years ago
• GMOD / JBrowseR
  R interface to the JBrowse 2 Linear Genome View.
  ☆39Updated last year
• costasilvati / consexpression
  Tool for RNA-Seq analysis.
  ☆39Updated 3 years ago
• COMBINE-lab / wasabi
  Prepare Sailfish and Salmon output for downstream analysis
  ☆42Updated 6 years ago
• schatzlab / scikit-ribo
  Accurate estimation and robust modelling of translation dynamics at codon resolution
  ☆22Updated 8 years ago
• cougarlj / COMPSRA
  COMPSRA: a COMprehensive Platform for Small RNA-Seq data Analysis
  ☆17Updated 5 years ago
• guigolab / bamstats
  A command line tool to compute mapping statistics from a BAM file
  ☆25Updated 3 years ago
• BIMSBbioinfo / pigx_rnaseq
  Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline
  ☆21Updated last week
• nf-core / lncpipe
  UNDER DEVELOPMENT--- Analysis of long non-coding RNAs from RNA-seq datasets
  ☆34Updated 10 months ago
• bioinf / caller_benchmark
  Companion repository for the human variant calling pipeline comparison paper
  ☆11Updated 3 years ago
• mritchielab / GlimmaV2
  interactive plots for differential expression analysis
  ☆34Updated 7 months ago
• lpantano / DEGreport
  Create a cromphensive report of DEG list coming from any analysis of RNAseq data
  ☆27Updated 3 months ago
• imbforge / NGSpipe2go
  a set of NGS pipelines
  ☆24Updated last month
• lfresard / blood_rnaseq_rare_disease_paper
  ☆29Updated 6 years ago
• yan-cri / DEApp
  DEAPP shiny App
  ☆30Updated 3 years ago
• btmonier / vidger
  Make rapid visualizations of RNA-seq data in R
  ☆20Updated 4 months ago
• stevekm / Bioinformatics
  Bioinformatics analysis scripts, workflows, general code examples
  ☆55Updated 4 years ago
• taunometsalu / ClustVis
  ClustVis web tool
  ☆55Updated 5 years ago
• wyguo / ThreeDRNAseq
  A pipeline for differential expression and differential alternative splicing analysis
  ☆67Updated last year
• ewels / Labrador
  A web based tool to manage and automate the processing of publicly available datasets.
  ☆39Updated 4 years ago
• likelet / IDEA
  Interactive Differential Expression Analyzer
  ☆37Updated 5 years ago
• sirselim / diagnostics_exome_reporting
  Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.
  ☆14Updated 6 years ago